Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 HMGB1P45-201ENST00000435986 653 ntBASIC5.96□□□□□ -1.46
DDX11Q96FC9 TRIM60P18-201ENST00000441518 828 ntBASIC5.96□□□□□ -1.46
DDX11Q96FC9 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC5.96□□□□□ -1.46
DDX11Q96FC9 AL137845.2-201ENST00000444292 988 ntBASIC5.96□□□□□ -1.46
DDX11Q96FC9 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.96□□□□□ -1.46
DDX11Q96FC9 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.96□□□□□ -1.46
DDX11Q96FC9 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.96□□□□□ -1.46
DDX11Q96FC9 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
DDX11Q96FC9 AC079776.3-201ENST00000450665 370 ntBASIC5.96□□□□□ -1.46
DDX11Q96FC9 AC093392.2-201ENST00000450682 337 ntBASIC5.96□□□□□ -1.46
DDX11Q96FC9 FGF7P6-202ENST00000451282 293 ntBASIC5.96□□□□□ -1.46
DDX11Q96FC9 AL133244.1-201ENST00000456007 258 ntBASIC5.96□□□□□ -1.46
DDX11Q96FC9 AC091180.1-201ENST00000462104 372 ntBASIC5.96□□□□□ -1.46
DDX11Q96FC9 MTCO3P38-201ENST00000468910 766 ntBASIC5.96□□□□□ -1.46
DDX11Q96FC9 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC5.96□□□□□ -1.46
DDX11Q96FC9 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.96□□□□□ -1.46
DDX11Q96FC9 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.96□□□□□ -1.46
DDX11Q96FC9 AC018442.3-201ENST00000523025 183 ntBASIC5.96□□□□□ -1.46
DDX11Q96FC9 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
DDX11Q96FC9 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
DDX11Q96FC9 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.96□□□□□ -1.46
DDX11Q96FC9 AC006349.1-201ENST00000555526 235 ntBASIC5.96□□□□□ -1.46
DDX11Q96FC9 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.96□□□□□ -1.46
DDX11Q96FC9 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.96□□□□□ -1.46
DDX11Q96FC9 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.96□□□□□ -1.46
DDX11Q96FC9 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.96□□□□□ -1.46
DDX11Q96FC9 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC5.96□□□□□ -1.46
DDX11Q96FC9 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.96□□□□□ -1.46
DDX11Q96FC9 BNIP3P26-201ENST00000600827 554 ntBASIC5.96□□□□□ -1.46
DDX11Q96FC9 AL356055.1-201ENST00000602528 446 ntBASIC5.96□□□□□ -1.46
DDX11Q96FC9 AC127502.3-201ENST00000636170 1206 ntBASIC5.96□□□□□ -1.46
DDX11Q96FC9 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
DDX11Q96FC9 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
DDX11Q96FC9 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
DDX11Q96FC9 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.96□□□□□ -1.46
DDX11Q96FC9 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.96□□□□□ -1.46
DDX11Q96FC9 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
DDX11Q96FC9 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.96□□□□□ -1.46
DDX11Q96FC9 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
DDX11Q96FC9 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
DDX11Q96FC9 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
DDX11Q96FC9 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
DDX11Q96FC9 AC092447.7-201ENST00000422212 1621 ntBASIC5.96□□□□□ -1.46
DDX11Q96FC9 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
DDX11Q96FC9 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.95□□□□□ -1.46
DDX11Q96FC9 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
DDX11Q96FC9 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
DDX11Q96FC9 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
DDX11Q96FC9 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
DDX11Q96FC9 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
DDX11Q96FC9 SNORA2.3-201ENST00000383920 135 ntBASIC5.95□□□□□ -1.46
DDX11Q96FC9 RNU6-244P-201ENST00000391028 104 ntBASIC5.95□□□□□ -1.46
DDX11Q96FC9 RNU2-66P-201ENST00000410650 161 ntBASIC5.95□□□□□ -1.46
DDX11Q96FC9 NRBF2P2-201ENST00000413087 861 ntBASIC5.95□□□□□ -1.46
DDX11Q96FC9 IPMKP1-201ENST00000425988 855 ntBASIC5.95□□□□□ -1.46
DDX11Q96FC9 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.95□□□□□ -1.46
DDX11Q96FC9 CNOT7P1-201ENST00000429006 852 ntBASIC5.95□□□□□ -1.46
DDX11Q96FC9 AC022022.1-201ENST00000430304 178 ntBASIC5.95□□□□□ -1.46
DDX11Q96FC9 MED14P1-201ENST00000430517 648 ntBASIC5.95□□□□□ -1.46
DDX11Q96FC9 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.95□□□□□ -1.46
DDX11Q96FC9 RHEBP2-201ENST00000450289 600 ntBASIC5.95□□□□□ -1.46
DDX11Q96FC9 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
DDX11Q96FC9 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.95□□□□□ -1.46
DDX11Q96FC9 AC138853.1-201ENST00000503549 823 ntBASIC5.95□□□□□ -1.46
DDX11Q96FC9 WBP1LP4-201ENST00000505043 344 ntBASIC5.95□□□□□ -1.46
DDX11Q96FC9 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.95□□□□□ -1.46
DDX11Q96FC9 AC023632.1-201ENST00000518463 375 ntBASIC5.95□□□□□ -1.46
DDX11Q96FC9 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.95□□□□□ -1.46
DDX11Q96FC9 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5.95□□□□□ -1.46
DDX11Q96FC9 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC5.95□□□□□ -1.46
DDX11Q96FC9 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC5.95□□□□□ -1.46
DDX11Q96FC9 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.95□□□□□ -1.46
DDX11Q96FC9 ZNF519P3-201ENST00000557158 1032 ntBASIC5.95□□□□□ -1.46
DDX11Q96FC9 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.95□□□□□ -1.46
DDX11Q96FC9 ATP5F1P7-201ENST00000567330 760 ntBASIC5.95□□□□□ -1.46
DDX11Q96FC9 MIR3936-201ENST00000584304 110 ntBASIC5.95□□□□□ -1.46
DDX11Q96FC9 SLC25A36P1-201ENST00000590111 465 ntBASIC5.95□□□□□ -1.46
DDX11Q96FC9 AC083899.3-201ENST00000603413 594 ntBASIC5.95□□□□□ -1.46
DDX11Q96FC9 AC103881.1-201ENST00000603476 538 ntBASIC5.95□□□□□ -1.46
DDX11Q96FC9 AC019072.1-201ENST00000604535 1551 ntBASIC5.95□□□□□ -1.46
DDX11Q96FC9 AL592221.1-201ENST00000605266 382 ntBASIC5.95□□□□□ -1.46
DDX11Q96FC9 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
DDX11Q96FC9 AC025594.3-201ENST00000613068 790 ntBASIC5.95□□□□□ -1.46
DDX11Q96FC9 AC021106.3-201ENST00000623925 531 ntBASIC5.95□□□□□ -1.46
DDX11Q96FC9 PCMTD1P7-201ENST00000634506 357 ntBASIC5.95□□□□□ -1.46
DDX11Q96FC9 AC116618.1-201ENST00000634617 774 ntBASIC5.95□□□□□ -1.46
DDX11Q96FC9 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
DDX11Q96FC9 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
DDX11Q96FC9 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.95□□□□□ -1.46
DDX11Q96FC9 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
DDX11Q96FC9 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
DDX11Q96FC9 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.94□□□□□ -1.46
DDX11Q96FC9 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.94□□□□□ -1.46
DDX11Q96FC9 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.94□□□□□ -1.46
DDX11Q96FC9 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.94□□□□□ -1.46
DDX11Q96FC9 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
DDX11Q96FC9 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.94□□□□□ -1.46
DDX11Q96FC9 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
DDX11Q96FC9 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.94□□□□□ -1.46
DDX11Q96FC9 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms