Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 AC048344.4-201ENST00000619744 527 ntBASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 AC007490.1-201ENST00000624321 703 ntBASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 AC018529.3-201ENST00000624212 2254 ntBASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 PHKBP1-201ENST00000450951 1951 ntBASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 MAPK10-303ENST00000641324 3959 ntBASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 RNU6-582P-201ENST00000362989 107 ntBASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 RNU6-178P-201ENST00000384631 104 ntBASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 PRRC2CP1-201ENST00000404428 159 ntBASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 RN7SKP106-201ENST00000410832 272 ntBASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 RSU1P3-201ENST00000412878 835 ntBASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 RGS17P1-201ENST00000423358 553 ntBASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 USP9YP11-201ENST00000427537 717 ntBASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 USP9YP9-201ENST00000429406 715 ntBASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 EEF1A1P1-201ENST00000447052 739 ntBASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 AC104978.1-201ENST00000449387 391 ntBASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 Z99714.1-201ENST00000450463 807 ntBASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 RPL21P134-201ENST00000453468 483 ntBASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 RFC5P1-201ENST00000454419 874 ntBASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 NDUFA12P1-201ENST00000455914 406 ntBASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 RPL5P24-201ENST00000463742 885 ntBASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 AP001189.2-201ENST00000527320 189 ntBASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 AP003461.1-201ENST00000528866 78 ntBASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 OR5AN2P-201ENST00000534535 896 ntBASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 AC005832.3-201ENST00000537929 631 ntBASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 AC009712.1-201ENST00000564938 316 ntBASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 AC018552.3-201ENST00000567416 561 ntBASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 MIR4737-201ENST00000583979 81 ntBASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 AC007390.2-201ENST00000606229 3803 ntBASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 AC007497.1-201ENST00000610421 561 ntBASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 AC090246.1-201ENST00000616499 426 ntBASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 AC131159.1-201ENST00000621854 213 ntBASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 AC012618.3-205ENST00000637896 1496 ntBASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.68□□□□□ -1.5
CHMP4CQ96CF2 Z98755.1-201ENST00000407015 1384 ntBASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 LINC01355-201ENST00000566551 5444 ntBASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 AC107027.3-201ENST00000565095 3473 ntBASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 SNORD113-6-201ENST00000363345 75 ntBASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 RNU6-398P-201ENST00000384143 109 ntBASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 RPS24P12-201ENST00000402084 394 ntBASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 AL139421.1-201ENST00000423010 169 ntBASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 ATP5F1P1-201ENST00000433775 569 ntBASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 RPS17P8-201ENST00000434525 335 ntBASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 RAB11AP1-201ENST00000442978 646 ntBASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 AURKAPS2-201ENST00000454983 333 ntBASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 RPL21P71-201ENST00000465598 459 ntBASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 AC006463.2-201ENST00000473326 348 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms