Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.74□□□□□ -1.49
TOPBP1Q92547 RNA5SP42-201ENST00000364278 115 ntBASIC5.74□□□□□ -1.49
TOPBP1Q92547 AL139095.1-201ENST00000404326 391 ntBASIC5.74□□□□□ -1.49
TOPBP1Q92547 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.74□□□□□ -1.49
TOPBP1Q92547 RPS20P1-201ENST00000434853 354 ntBASIC5.74□□□□□ -1.49
TOPBP1Q92547 AC006028.1-201ENST00000438379 402 ntBASIC5.74□□□□□ -1.49
TOPBP1Q92547 KC877373.1-201ENST00000479066 408 ntBASIC5.74□□□□□ -1.49
TOPBP1Q92547 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.74□□□□□ -1.49
TOPBP1Q92547 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.74□□□□□ -1.49
TOPBP1Q92547 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.74□□□□□ -1.49
TOPBP1Q92547 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC5.74□□□□□ -1.49
TOPBP1Q92547 HNRNPDLP4-201ENST00000605144 301 ntBASIC5.74□□□□□ -1.49
TOPBP1Q92547 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC5.74□□□□□ -1.49
TOPBP1Q92547 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
TOPBP1Q92547 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TOPBP1Q92547 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
TOPBP1Q92547 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.74□□□□□ -1.49
TOPBP1Q92547 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
TOPBP1Q92547 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.74□□□□□ -1.49
TOPBP1Q92547 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.74□□□□□ -1.49
TOPBP1Q92547 RNU6-729P-201ENST00000384399 107 ntBASIC5.74□□□□□ -1.49
TOPBP1Q92547 AL353678.1-201ENST00000422735 741 ntBASIC5.74□□□□□ -1.49
TOPBP1Q92547 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.74□□□□□ -1.49
TOPBP1Q92547 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC5.74□□□□□ -1.49
TOPBP1Q92547 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.74□□□□□ -1.49
TOPBP1Q92547 AC023598.1-201ENST00000472521 361 ntBASIC5.74□□□□□ -1.49
TOPBP1Q92547 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.74□□□□□ -1.49
TOPBP1Q92547 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.74□□□□□ -1.49
TOPBP1Q92547 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.74□□□□□ -1.49
TOPBP1Q92547 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.74□□□□□ -1.49
TOPBP1Q92547 AC013412.1-201ENST00000610687 192 ntBASIC5.74□□□□□ -1.49
TOPBP1Q92547 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TOPBP1Q92547 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TOPBP1Q92547 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.73□□□□□ -1.49
TOPBP1Q92547 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TOPBP1Q92547 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
TOPBP1Q92547 DDX18P4-201ENST00000511690 1966 ntBASIC5.73□□□□□ -1.49
TOPBP1Q92547 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.73□□□□□ -1.49
TOPBP1Q92547 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TOPBP1Q92547 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.73□□□□□ -1.49
TOPBP1Q92547 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TOPBP1Q92547 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TOPBP1Q92547 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.73□□□□□ -1.49
TOPBP1Q92547 SNORA54-201ENST00000384281 123 ntBASIC5.73□□□□□ -1.49
TOPBP1Q92547 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC5.73□□□□□ -1.49
TOPBP1Q92547 AC084357.1-201ENST00000473404 255 ntBASIC5.73□□□□□ -1.49
TOPBP1Q92547 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TOPBP1Q92547 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC5.73□□□□□ -1.49
TOPBP1Q92547 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.73□□□□□ -1.49
TOPBP1Q92547 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.73□□□□□ -1.49
TOPBP1Q92547 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.73□□□□□ -1.49
TOPBP1Q92547 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
TOPBP1Q92547 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TOPBP1Q92547 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TOPBP1Q92547 AC011503.2-201ENST00000594230 1500 ntBASIC5.72□□□□□ -1.49
TOPBP1Q92547 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TOPBP1Q92547 SRP72P2-201ENST00000344851 1979 ntBASIC5.72□□□□□ -1.49
TOPBP1Q92547 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TOPBP1Q92547 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TOPBP1Q92547 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
TOPBP1Q92547 SNORA48.8-201ENST00000391324 134 ntBASIC5.72□□□□□ -1.49
TOPBP1Q92547 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.72□□□□□ -1.49
TOPBP1Q92547 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC5.72□□□□□ -1.49
TOPBP1Q92547 AC139783.2-201ENST00000504847 1145 ntBASIC5.72□□□□□ -1.49
TOPBP1Q92547 AC112198.1-201ENST00000505369 1220 ntBASIC5.72□□□□□ -1.49
TOPBP1Q92547 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC5.72□□□□□ -1.49
TOPBP1Q92547 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.72□□□□□ -1.49
TOPBP1Q92547 AC087276.1-201ENST00000529659 480 ntBASIC5.72□□□□□ -1.49
TOPBP1Q92547 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TOPBP1Q92547 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.72□□□□□ -1.49
TOPBP1Q92547 MIR3945-201ENST00000581853 98 ntBASIC5.72□□□□□ -1.49
TOPBP1Q92547 KLKP1-201ENST00000595979 403 ntBASIC5.72□□□□□ -1.49
TOPBP1Q92547 AP003392.5-201ENST00000607857 415 ntBASIC5.72□□□□□ -1.49
TOPBP1Q92547 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TOPBP1Q92547 OTUD4P1-201ENST00000237841 3067 ntBASIC5.72□□□□□ -1.49
TOPBP1Q92547 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
TOPBP1Q92547 ZNF90P1-201ENST00000480493 1951 ntBASIC5.72□□□□□ -1.49
TOPBP1Q92547 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.71□□□□□ -1.5
TOPBP1Q92547 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
TOPBP1Q92547 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TOPBP1Q92547 RNU1-108P-201ENST00000362556 161 ntBASIC5.71□□□□□ -1.5
TOPBP1Q92547 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TOPBP1Q92547 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TOPBP1Q92547 RN7SL863P-201ENST00000462370 296 ntBASIC5.71□□□□□ -1.5
TOPBP1Q92547 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.71□□□□□ -1.5
TOPBP1Q92547 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.71□□□□□ -1.5
TOPBP1Q92547 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
TOPBP1Q92547 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
TOPBP1Q92547 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TOPBP1Q92547 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.71□□□□□ -1.5
TOPBP1Q92547 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
TOPBP1Q92547 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC5.71□□□□□ -1.5
TOPBP1Q92547 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
TOPBP1Q92547 MTCO1P24-201ENST00000515438 1558 ntBASIC5.71□□□□□ -1.5
TOPBP1Q92547 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
TOPBP1Q92547 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
TOPBP1Q92547 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.7□□□□□ -1.5
TOPBP1Q92547 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TOPBP1Q92547 MOB1AP1-201ENST00000430903 535 ntBASIC5.7□□□□□ -1.5
TOPBP1Q92547 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms