Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AC112484.5-201ENST00000624189 228 ntBASIC3.23□□□□□ -1.89
RTN4IP1Q8WWV3 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
RTN4IP1Q8WWV3 AC009452.1-201ENST00000640823 606 ntBASIC3.23□□□□□ -1.89
RTN4IP1Q8WWV3 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RTN4IP1Q8WWV3 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RTN4IP1Q8WWV3 AC106871.1-201ENST00000568324 3102 ntBASIC3.23□□□□□ -1.89
RTN4IP1Q8WWV3 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RTN4IP1Q8WWV3 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 RNA5SP443-201ENST00000363083 132 ntBASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 RNU6-40P-201ENST00000384254 107 ntBASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 RNU6-244P-201ENST00000391028 104 ntBASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 NDUFA5P10-201ENST00000432147 357 ntBASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 RPS26P40-201ENST00000435209 294 ntBASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 AC114755.5-201ENST00000447760 831 ntBASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 NANOGP10-201ENST00000453325 895 ntBASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 SNRPGP5-201ENST00000456003 220 ntBASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 AC110792.1-201ENST00000491826 472 ntBASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 NIPA2P2-201ENST00000496376 1083 ntBASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 RNU6-760P-201ENST00000516078 97 ntBASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 AC026616.1-201ENST00000523157 525 ntBASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 TOMM20P2-201ENST00000540082 421 ntBASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 MIMT1-201ENST00000597105 1050 ntBASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 AL590392.1-201ENST00000604960 446 ntBASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 AC015802.5-201ENST00000607478 399 ntBASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 MIR6867-201ENST00000610636 67 ntBASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.22□□□□□ -1.89
RTN4IP1Q8WWV3 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.89
RTN4IP1Q8WWV3 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
RTN4IP1Q8WWV3 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.89
RTN4IP1Q8WWV3 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 RLIMP1-201ENST00000339626 1680 ntBASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 SNORA70.2-201ENST00000364506 135 ntBASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 SNORA27.3-201ENST00000364937 134 ntBASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 AC068538.1-201ENST00000376856 336 ntBASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 RPL21P65-201ENST00000406094 466 ntBASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 Z98941.1-201ENST00000407764 100 ntBASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 RNA5SP317-201ENST00000410176 116 ntBASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 RNU4-6P-201ENST00000410804 122 ntBASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 RNA5SP311-201ENST00000411290 116 ntBASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 AL590623.1-201ENST00000427864 105 ntBASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 BMS1P19-201ENST00000433925 393 ntBASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 AL627224.1-201ENST00000448334 444 ntBASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 HMGB1P47-201ENST00000511281 589 ntBASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 RNA5SP315-201ENST00000516340 116 ntBASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 RNA5SP312-201ENST00000517068 116 ntBASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 OR4A12P-201ENST00000530847 918 ntBASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 AL109741.3-201ENST00000561748 592 ntBASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 AL034351.1-201ENST00000605288 668 ntBASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 AC084036.1-201ENST00000609190 508 ntBASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 AC006946.3-201ENST00000609791 756 ntBASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 OR6C71P-202ENST00000641886 1107 ntBASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms