Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC004069.2-201ENST00000505438 1114 ntBASIC3.73□□□□□ -1.81
SHROOM3Q8TF72 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.73□□□□□ -1.81
SHROOM3Q8TF72 AP006245.1-201ENST00000522549 120 ntBASIC3.73□□□□□ -1.81
SHROOM3Q8TF72 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.73□□□□□ -1.81
SHROOM3Q8TF72 AC115621.1-201ENST00000604653 858 ntBASIC3.73□□□□□ -1.81
SHROOM3Q8TF72 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.73□□□□□ -1.81
SHROOM3Q8TF72 AL122125.1-201ENST00000616999 600 ntBASIC3.73□□□□□ -1.81
SHROOM3Q8TF72 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.73□□□□□ -1.81
SHROOM3Q8TF72 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SHROOM3Q8TF72 SNORD9-201ENST00000362566 104 ntBASIC3.72□□□□□ -1.81
SHROOM3Q8TF72 RN7SKP53-201ENST00000411337 315 ntBASIC3.72□□□□□ -1.81
SHROOM3Q8TF72 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.72□□□□□ -1.81
SHROOM3Q8TF72 SYF2P2-201ENST00000417620 583 ntBASIC3.72□□□□□ -1.81
SHROOM3Q8TF72 RPL7P44-201ENST00000424827 742 ntBASIC3.72□□□□□ -1.81
SHROOM3Q8TF72 RPL7P23-201ENST00000493874 747 ntBASIC3.72□□□□□ -1.81
SHROOM3Q8TF72 RPL5P23-201ENST00000496040 868 ntBASIC3.72□□□□□ -1.81
SHROOM3Q8TF72 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.72□□□□□ -1.81
SHROOM3Q8TF72 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.72□□□□□ -1.81
SHROOM3Q8TF72 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.72□□□□□ -1.81
SHROOM3Q8TF72 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SHROOM3Q8TF72 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.72□□□□□ -1.81
SHROOM3Q8TF72 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.72□□□□□ -1.81
SHROOM3Q8TF72 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.72□□□□□ -1.81
SHROOM3Q8TF72 AC012493.2-201ENST00000595083 291 ntBASIC3.72□□□□□ -1.81
SHROOM3Q8TF72 AP000553.6-201ENST00000641242 118 ntBASIC3.72□□□□□ -1.81
SHROOM3Q8TF72 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SHROOM3Q8TF72 CR381670.1-201ENST00000624291 1693 ntBASIC3.72□□□□□ -1.81
SHROOM3Q8TF72 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC3.72□□□□□ -1.81
SHROOM3Q8TF72 SAGE2P-201ENST00000420011 2126 ntBASIC3.72□□□□□ -1.81
SHROOM3Q8TF72 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.72□□□□□ -1.81
SHROOM3Q8TF72 AC007823.1-201ENST00000569932 1566 ntBASIC3.72□□□□□ -1.81
SHROOM3Q8TF72 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SHROOM3Q8TF72 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC3.72□□□□□ -1.81
SHROOM3Q8TF72 NACA3P-201ENST00000359690 648 ntBASIC3.72□□□□□ -1.81
SHROOM3Q8TF72 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SHROOM3Q8TF72 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SHROOM3Q8TF72 AL158071.1-201ENST00000430315 461 ntBASIC3.72□□□□□ -1.81
SHROOM3Q8TF72 MTCO1P45-201ENST00000431457 267 ntBASIC3.72□□□□□ -1.81
SHROOM3Q8TF72 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.72□□□□□ -1.81
SHROOM3Q8TF72 RPL37P3-201ENST00000456825 293 ntBASIC3.72□□□□□ -1.81
SHROOM3Q8TF72 AL133477.1-201ENST00000457472 514 ntBASIC3.72□□□□□ -1.81
SHROOM3Q8TF72 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.72□□□□□ -1.81
SHROOM3Q8TF72 OR5B10P-201ENST00000532869 642 ntBASIC3.72□□□□□ -1.81
SHROOM3Q8TF72 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.72□□□□□ -1.81
SHROOM3Q8TF72 AC092354.2-201ENST00000607786 514 ntBASIC3.72□□□□□ -1.81
SHROOM3Q8TF72 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.72□□□□□ -1.81
SHROOM3Q8TF72 LINC00901.1-201ENST00000617252 152 ntBASIC3.72□□□□□ -1.81
SHROOM3Q8TF72 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SHROOM3Q8TF72 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SHROOM3Q8TF72 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.72□□□□□ -1.81
SHROOM3Q8TF72 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.81
SHROOM3Q8TF72 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
SHROOM3Q8TF72 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC3.71□□□□□ -1.81
SHROOM3Q8TF72 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
SHROOM3Q8TF72 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SHROOM3Q8TF72 FRG1CP-201ENST00000358464 769 ntBASIC3.71□□□□□ -1.82
SHROOM3Q8TF72 RNA5SP424-201ENST00000390988 115 ntBASIC3.71□□□□□ -1.82
SHROOM3Q8TF72 HSPE1P8-201ENST00000406997 288 ntBASIC3.71□□□□□ -1.82
SHROOM3Q8TF72 AC069306.1-201ENST00000507006 843 ntBASIC3.71□□□□□ -1.82
SHROOM3Q8TF72 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.71□□□□□ -1.82
SHROOM3Q8TF72 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.71□□□□□ -1.82
SHROOM3Q8TF72 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SHROOM3Q8TF72 AL450472.3-201ENST00000615578 367 ntBASIC3.71□□□□□ -1.82
SHROOM3Q8TF72 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.71□□□□□ -1.82
SHROOM3Q8TF72 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.71□□□□□ -1.82
SHROOM3Q8TF72 AC007656.2-201ENST00000624902 4547 ntBASIC3.71□□□□□ -1.82
SHROOM3Q8TF72 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SHROOM3Q8TF72 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.71□□□□□ -1.82
SHROOM3Q8TF72 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
SHROOM3Q8TF72 AC017079.2-201ENST00000416102 485 ntBASIC3.71□□□□□ -1.82
SHROOM3Q8TF72 AL512649.1-201ENST00000428997 581 ntBASIC3.71□□□□□ -1.82
SHROOM3Q8TF72 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.71□□□□□ -1.82
SHROOM3Q8TF72 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.71□□□□□ -1.82
SHROOM3Q8TF72 RPS6P2-201ENST00000454208 705 ntBASIC3.71□□□□□ -1.82
SHROOM3Q8TF72 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.71□□□□□ -1.82
SHROOM3Q8TF72 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SHROOM3Q8TF72 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC3.71□□□□□ -1.82
SHROOM3Q8TF72 AC097462.2-201ENST00000504623 481 ntBASIC3.71□□□□□ -1.82
SHROOM3Q8TF72 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.71□□□□□ -1.82
SHROOM3Q8TF72 HIGD1AP18-201ENST00000520730 278 ntBASIC3.71□□□□□ -1.82
SHROOM3Q8TF72 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.71□□□□□ -1.82
SHROOM3Q8TF72 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.71□□□□□ -1.82
SHROOM3Q8TF72 AL392088.2-201ENST00000637607 285 ntBASIC3.71□□□□□ -1.82
SHROOM3Q8TF72 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SHROOM3Q8TF72 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SHROOM3Q8TF72 AL356274.2-201ENST00000624379 3752 ntBASIC3.7□□□□□ -1.82
SHROOM3Q8TF72 NCAPGP1-201ENST00000505112 1814 ntBASIC3.7□□□□□ -1.82
SHROOM3Q8TF72 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SHROOM3Q8TF72 AC123912.3-201ENST00000600907 1367 ntBASIC3.7□□□□□ -1.82
SHROOM3Q8TF72 Y_RNA.510-201ENST00000384511 114 ntBASIC3.7□□□□□ -1.82
SHROOM3Q8TF72 ZNF602P-201ENST00000405929 924 ntBASIC3.7□□□□□ -1.82
SHROOM3Q8TF72 RNA5SP296-201ENST00000410523 111 ntBASIC3.7□□□□□ -1.82
SHROOM3Q8TF72 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SHROOM3Q8TF72 AL691447.1-201ENST00000419456 387 ntBASIC3.7□□□□□ -1.82
SHROOM3Q8TF72 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.7□□□□□ -1.82
SHROOM3Q8TF72 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.7□□□□□ -1.82
SHROOM3Q8TF72 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC3.7□□□□□ -1.82
SHROOM3Q8TF72 RPS4XP10-201ENST00000465034 731 ntBASIC3.7□□□□□ -1.82
SHROOM3Q8TF72 AC010307.1-201ENST00000467206 836 ntBASIC3.7□□□□□ -1.82
SHROOM3Q8TF72 RPS3AP14-201ENST00000483907 780 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms