Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.4□□□□□ -1.55
NUP43Q8NFH3 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
NUP43Q8NFH3 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
NUP43Q8NFH3 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
NUP43Q8NFH3 AC024560.2-201ENST00000507981 1497 ntBASIC5.39□□□□□ -1.55
NUP43Q8NFH3 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
NUP43Q8NFH3 AC006210.2-201ENST00000367074 1545 ntBASIC5.39□□□□□ -1.55
NUP43Q8NFH3 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
NUP43Q8NFH3 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NUP43Q8NFH3 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NUP43Q8NFH3 RNU6-845P-201ENST00000362578 103 ntBASIC5.39□□□□□ -1.55
NUP43Q8NFH3 RNA5SP477-201ENST00000362639 119 ntBASIC5.39□□□□□ -1.55
NUP43Q8NFH3 RNU6-289P-201ENST00000364093 107 ntBASIC5.39□□□□□ -1.55
NUP43Q8NFH3 RNA5SP500-201ENST00000364486 119 ntBASIC5.39□□□□□ -1.55
NUP43Q8NFH3 Y_RNA.394-201ENST00000383942 103 ntBASIC5.39□□□□□ -1.55
NUP43Q8NFH3 RNU6-767P-201ENST00000384132 107 ntBASIC5.39□□□□□ -1.55
NUP43Q8NFH3 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NUP43Q8NFH3 RPS20P2-201ENST00000402520 389 ntBASIC5.39□□□□□ -1.55
NUP43Q8NFH3 AL590004.1-201ENST00000405321 300 ntBASIC5.39□□□□□ -1.55
NUP43Q8NFH3 MRPL53P1-201ENST00000414323 319 ntBASIC5.39□□□□□ -1.55
NUP43Q8NFH3 RPL7P57-201ENST00000423238 740 ntBASIC5.39□□□□□ -1.55
NUP43Q8NFH3 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.39□□□□□ -1.55
NUP43Q8NFH3 GTF2IP20-201ENST00000431663 360 ntBASIC5.39□□□□□ -1.55
NUP43Q8NFH3 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.39□□□□□ -1.55
NUP43Q8NFH3 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.39□□□□□ -1.55
NUP43Q8NFH3 AC110602.1-201ENST00000437414 318 ntBASIC5.39□□□□□ -1.55
NUP43Q8NFH3 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.39□□□□□ -1.55
NUP43Q8NFH3 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.39□□□□□ -1.55
NUP43Q8NFH3 HMGN1P2-201ENST00000445197 310 ntBASIC5.39□□□□□ -1.55
NUP43Q8NFH3 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.39□□□□□ -1.55
NUP43Q8NFH3 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.39□□□□□ -1.55
NUP43Q8NFH3 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC5.39□□□□□ -1.55
NUP43Q8NFH3 RNU7-136P-201ENST00000458819 69 ntBASIC5.39□□□□□ -1.55
NUP43Q8NFH3 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.39□□□□□ -1.55
NUP43Q8NFH3 AC139783.2-201ENST00000504847 1145 ntBASIC5.39□□□□□ -1.55
NUP43Q8NFH3 Y_RNA.667-201ENST00000516212 107 ntBASIC5.39□□□□□ -1.55
NUP43Q8NFH3 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC5.39□□□□□ -1.55
NUP43Q8NFH3 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.39□□□□□ -1.55
NUP43Q8NFH3 IGLV3-30-201ENST00000524362 298 ntBASIC5.39□□□□□ -1.55
NUP43Q8NFH3 AP003181.2-201ENST00000528941 181 ntBASIC5.39□□□□□ -1.55
NUP43Q8NFH3 TRIM51DP-201ENST00000529746 596 ntBASIC5.39□□□□□ -1.55
NUP43Q8NFH3 OR4A12P-201ENST00000530847 918 ntBASIC5.39□□□□□ -1.55
NUP43Q8NFH3 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.39□□□□□ -1.55
NUP43Q8NFH3 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC5.39□□□□□ -1.55
NUP43Q8NFH3 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.39□□□□□ -1.55
NUP43Q8NFH3 AC034268.2-201ENST00000571784 482 ntBASIC5.39□□□□□ -1.55
NUP43Q8NFH3 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.39□□□□□ -1.55
NUP43Q8NFH3 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.39□□□□□ -1.55
NUP43Q8NFH3 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.39□□□□□ -1.55
NUP43Q8NFH3 AC068790.5-201ENST00000602741 355 ntBASIC5.39□□□□□ -1.55
NUP43Q8NFH3 AL136363.1-201ENST00000605349 337 ntBASIC5.39□□□□□ -1.55
NUP43Q8NFH3 uc_338.9-201ENST00000617424 182 ntBASIC5.39□□□□□ -1.55
NUP43Q8NFH3 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.39□□□□□ -1.55
NUP43Q8NFH3 AC024884.1-201ENST00000620583 399 ntBASIC5.39□□□□□ -1.55
NUP43Q8NFH3 AP006248.2-201ENST00000623309 592 ntBASIC5.39□□□□□ -1.55
NUP43Q8NFH3 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NUP43Q8NFH3 CDRT1-208ENST00000630868 794 ntBASIC5.39□□□□□ -1.55
NUP43Q8NFH3 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NUP43Q8NFH3 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
NUP43Q8NFH3 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NUP43Q8NFH3 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
NUP43Q8NFH3 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NUP43Q8NFH3 AC004076.2-201ENST00000620532 3323 ntBASIC5.39□□□□□ -1.55
NUP43Q8NFH3 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.39□□□□□ -1.55
NUP43Q8NFH3 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NUP43Q8NFH3 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.39□□□□□ -1.55
NUP43Q8NFH3 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
NUP43Q8NFH3 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NUP43Q8NFH3 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NUP43Q8NFH3 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NUP43Q8NFH3 MAPK10-261ENST00000641050 3109 ntBASIC5.39□□□□□ -1.55
NUP43Q8NFH3 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 SYF2-202ENST00000354361 926 ntTSL 2 BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 SNORD81.2-201ENST00000365153 76 ntBASIC5.38□□□□□ -1.55
NUP43Q8NFH3 RNA5SP118-201ENST00000410385 109 ntBASIC5.38□□□□□ -1.55
NUP43Q8NFH3 RN7SKP240-201ENST00000410583 375 ntBASIC5.38□□□□□ -1.55
NUP43Q8NFH3 AL357752.1-201ENST00000412817 349 ntBASIC5.38□□□□□ -1.55
NUP43Q8NFH3 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 TEX41-204ENST00000423031 491 ntTSL 4 BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 AC115283.1-201ENST00000427353 400 ntBASIC5.38□□□□□ -1.55
NUP43Q8NFH3 AC005534.2-201ENST00000431047 433 ntBASIC5.38□□□□□ -1.55
NUP43Q8NFH3 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 RPL7P54-201ENST00000438336 674 ntBASIC5.38□□□□□ -1.55
NUP43Q8NFH3 CBX1P4-201ENST00000439415 457 ntBASIC5.38□□□□□ -1.55
NUP43Q8NFH3 CBX1P1-201ENST00000440184 427 ntBASIC5.38□□□□□ -1.55
NUP43Q8NFH3 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 RPS15AP1-201ENST00000457423 391 ntBASIC5.38□□□□□ -1.55
NUP43Q8NFH3 RPS23P2-201ENST00000463671 415 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms