Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VPS8Q8N3P4 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VPS8Q8N3P4 MIR34B-201ENST00000385076 84 ntBASIC5.36□□□□□ -1.55
VPS8Q8N3P4 AL136116.1-201ENST00000403591 381 ntBASIC5.36□□□□□ -1.55
VPS8Q8N3P4 AC017078.1-201ENST00000416146 368 ntBASIC5.36□□□□□ -1.55
VPS8Q8N3P4 AL158156.1-201ENST00000422509 473 ntBASIC5.36□□□□□ -1.55
VPS8Q8N3P4 CYCSP35-201ENST00000451978 304 ntBASIC5.36□□□□□ -1.55
VPS8Q8N3P4 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.36□□□□□ -1.55
VPS8Q8N3P4 AC092868.3-201ENST00000560515 784 ntBASIC5.36□□□□□ -1.55
VPS8Q8N3P4 AC106785.3-201ENST00000564064 847 ntBASIC5.36□□□□□ -1.55
VPS8Q8N3P4 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC5.36□□□□□ -1.55
VPS8Q8N3P4 MIR3200-201ENST00000580767 85 ntBASIC5.36□□□□□ -1.55
VPS8Q8N3P4 BNIP3P38-201ENST00000601117 544 ntBASIC5.36□□□□□ -1.55
VPS8Q8N3P4 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.36□□□□□ -1.55
VPS8Q8N3P4 AL513302.2-201ENST00000562313 1842 ntBASIC5.36□□□□□ -1.55
VPS8Q8N3P4 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
VPS8Q8N3P4 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
VPS8Q8N3P4 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.35□□□□□ -1.55
VPS8Q8N3P4 RNU1-70P-201ENST00000362618 164 ntBASIC5.35□□□□□ -1.55
VPS8Q8N3P4 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC5.35□□□□□ -1.55
VPS8Q8N3P4 BX323014.1-201ENST00000412876 237 ntBASIC5.35□□□□□ -1.55
VPS8Q8N3P4 ATP5C1P1-201ENST00000441945 895 ntBASIC5.35□□□□□ -1.55
VPS8Q8N3P4 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC5.35□□□□□ -1.55
VPS8Q8N3P4 Z75741.1-201ENST00000446793 314 ntBASIC5.35□□□□□ -1.55
VPS8Q8N3P4 AC021205.2-201ENST00000480069 347 ntBASIC5.35□□□□□ -1.55
VPS8Q8N3P4 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.35□□□□□ -1.55
VPS8Q8N3P4 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.35□□□□□ -1.55
VPS8Q8N3P4 AL031985.2-201ENST00000600955 480 ntBASIC5.35□□□□□ -1.55
VPS8Q8N3P4 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.35□□□□□ -1.55
VPS8Q8N3P4 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS8Q8N3P4 AC241377.1-201ENST00000619797 406 ntBASIC5.35□□□□□ -1.55
VPS8Q8N3P4 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS8Q8N3P4 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VPS8Q8N3P4 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC5.35□□□□□ -1.55
VPS8Q8N3P4 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
VPS8Q8N3P4 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VPS8Q8N3P4 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VPS8Q8N3P4 CDY11P-201ENST00000447168 1651 ntBASIC5.35□□□□□ -1.55
VPS8Q8N3P4 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VPS8Q8N3P4 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS8Q8N3P4 AC027287.1-201ENST00000553115 1453 ntBASIC5.34□□□□□ -1.55
VPS8Q8N3P4 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VPS8Q8N3P4 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VPS8Q8N3P4 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC5.34□□□□□ -1.55
VPS8Q8N3P4 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.34□□□□□ -1.55
VPS8Q8N3P4 RPL23AP82-202ENST00000427528 469 ntBASIC5.34□□□□□ -1.55
VPS8Q8N3P4 AL357552.1-201ENST00000445254 415 ntBASIC5.34□□□□□ -1.55
VPS8Q8N3P4 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.34□□□□□ -1.55
VPS8Q8N3P4 CENPBD1P1-201ENST00000464061 469 ntBASIC5.34□□□□□ -1.55
VPS8Q8N3P4 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.34□□□□□ -1.55
VPS8Q8N3P4 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.55
VPS8Q8N3P4 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.34□□□□□ -1.55
VPS8Q8N3P4 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC5.34□□□□□ -1.55
VPS8Q8N3P4 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC5.34□□□□□ -1.55
VPS8Q8N3P4 SNORA74D-201ENST00000516404 141 ntBASIC5.34□□□□□ -1.55
VPS8Q8N3P4 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5.34□□□□□ -1.55
VPS8Q8N3P4 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.34□□□□□ -1.55
VPS8Q8N3P4 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VPS8Q8N3P4 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
VPS8Q8N3P4 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VPS8Q8N3P4 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VPS8Q8N3P4 MAPK10-373ENST00000641983 6772 ntBASIC5.34□□□□□ -1.55
VPS8Q8N3P4 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC5.34□□□□□ -1.56
VPS8Q8N3P4 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
VPS8Q8N3P4 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS8Q8N3P4 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS8Q8N3P4 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
VPS8Q8N3P4 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS8Q8N3P4 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS8Q8N3P4 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.33□□□□□ -1.56
VPS8Q8N3P4 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS8Q8N3P4 AC015802.5-201ENST00000607478 399 ntBASIC5.33□□□□□ -1.56
VPS8Q8N3P4 AL354976.1-201ENST00000613843 387 ntBASIC5.33□□□□□ -1.56
VPS8Q8N3P4 AL442067.2-201ENST00000614033 363 ntBASIC5.33□□□□□ -1.56
VPS8Q8N3P4 TEX41-265ENST00000627785 704 ntTSL 5 BASIC5.33□□□□□ -1.56
VPS8Q8N3P4 AC005332.5-201ENST00000591222 2919 ntBASIC5.33□□□□□ -1.56
VPS8Q8N3P4 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.33□□□□□ -1.56
VPS8Q8N3P4 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS8Q8N3P4 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
VPS8Q8N3P4 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
VPS8Q8N3P4 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
VPS8Q8N3P4 AL133477.1-201ENST00000457472 514 ntBASIC5.32□□□□□ -1.56
VPS8Q8N3P4 AC073522.1-201ENST00000483312 377 ntBASIC5.32□□□□□ -1.56
VPS8Q8N3P4 RPL7P38-201ENST00000488396 739 ntBASIC5.32□□□□□ -1.56
VPS8Q8N3P4 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
VPS8Q8N3P4 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC5.32□□□□□ -1.56
VPS8Q8N3P4 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.32□□□□□ -1.56
VPS8Q8N3P4 RDM1-219ENST00000615378 542 ntTSL 3 BASIC5.32□□□□□ -1.56
VPS8Q8N3P4 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
VPS8Q8N3P4 RMST_9.1-201ENST00000619945 193 ntBASIC5.32□□□□□ -1.56
VPS8Q8N3P4 AC091953.5-201ENST00000622919 233 ntBASIC5.32□□□□□ -1.56
VPS8Q8N3P4 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.32□□□□□ -1.56
VPS8Q8N3P4 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VPS8Q8N3P4 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.32□□□□□ -1.56
VPS8Q8N3P4 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.31□□□□□ -1.56
VPS8Q8N3P4 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VPS8Q8N3P4 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS8Q8N3P4 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.31□□□□□ -1.56
VPS8Q8N3P4 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS8Q8N3P4 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms