Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 MYL12AP1-201ENST00000518490 515 ntBASIC6.32□□□□□ -1.4
DEPDC4Q8N2C3 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
DEPDC4Q8N2C3 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC6.32□□□□□ -1.4
DEPDC4Q8N2C3 PCNAP4-201ENST00000532690 730 ntBASIC6.32□□□□□ -1.4
DEPDC4Q8N2C3 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC6.32□□□□□ -1.4
DEPDC4Q8N2C3 SNRPGP18-201ENST00000553000 214 ntBASIC6.32□□□□□ -1.4
DEPDC4Q8N2C3 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC6.32□□□□□ -1.4
DEPDC4Q8N2C3 AC005341.1-201ENST00000571086 708 ntBASIC6.32□□□□□ -1.4
DEPDC4Q8N2C3 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
DEPDC4Q8N2C3 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC6.32□□□□□ -1.4
DEPDC4Q8N2C3 BNIP3P25-201ENST00000596023 559 ntBASIC6.32□□□□□ -1.4
DEPDC4Q8N2C3 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.32□□□□□ -1.4
DEPDC4Q8N2C3 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC6.32□□□□□ -1.4
DEPDC4Q8N2C3 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC6.32□□□□□ -1.4
DEPDC4Q8N2C3 AC012510.1-201ENST00000607946 759 ntBASIC6.32□□□□□ -1.4
DEPDC4Q8N2C3 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC6.32□□□□□ -1.4
DEPDC4Q8N2C3 AL121782.1-201ENST00000611242 413 ntBASIC6.32□□□□□ -1.4
DEPDC4Q8N2C3 AL161931.1-201ENST00000612768 246 ntBASIC6.32□□□□□ -1.4
DEPDC4Q8N2C3 AC116447.1-201ENST00000613153 453 ntBASIC6.32□□□□□ -1.4
DEPDC4Q8N2C3 AC245407.2-201ENST00000614199 451 ntBASIC6.32□□□□□ -1.4
DEPDC4Q8N2C3 AL590099.1-201ENST00000615276 138 ntBASIC6.32□□□□□ -1.4
DEPDC4Q8N2C3 7SK.10-201ENST00000621414 298 ntBASIC6.32□□□□□ -1.4
DEPDC4Q8N2C3 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC6.32□□□□□ -1.4
DEPDC4Q8N2C3 AL359757.2-201ENST00000624309 274 ntBASIC6.32□□□□□ -1.4
DEPDC4Q8N2C3 ASB8-218ENST00000629941 278 ntTSL 5 BASIC6.32□□□□□ -1.4
DEPDC4Q8N2C3 MIR665-201ENST00000635949 72 ntBASIC6.32□□□□□ -1.4
DEPDC4Q8N2C3 AC135068.12-201ENST00000637370 931 ntBASIC6.32□□□□□ -1.4
DEPDC4Q8N2C3 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
DEPDC4Q8N2C3 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
DEPDC4Q8N2C3 AC012618.3-205ENST00000637896 1496 ntBASIC6.32□□□□□ -1.4
DEPDC4Q8N2C3 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.32□□□□□ -1.4
DEPDC4Q8N2C3 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
DEPDC4Q8N2C3 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
DEPDC4Q8N2C3 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
DEPDC4Q8N2C3 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.32□□□□□ -1.4
DEPDC4Q8N2C3 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
DEPDC4Q8N2C3 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 AC091305.2-201ENST00000624049 1576 ntBASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 PAPPA-AS1-201ENST00000445861 2450 ntBASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 AC093278.2-201ENST00000564956 2485 ntBASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 RNU6-179P-201ENST00000363350 107 ntBASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 Y_RNA.133-201ENST00000363428 110 ntBASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 RNA5SP429-201ENST00000363688 109 ntBASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 Y_RNA.167-201ENST00000363735 109 ntBASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 SNORD113-7-201ENST00000363762 77 ntBASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 RNA5SP472-201ENST00000363868 119 ntBASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 SNORA22B-201ENST00000383876 138 ntBASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 RNA5SP35-201ENST00000391257 129 ntBASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 RNU4-14P-201ENST00000410858 122 ntBASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 AC068533.1-201ENST00000418542 415 ntBASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 RPL23AP38-201ENST00000423801 469 ntBASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 AL121776.1-201ENST00000429337 372 ntBASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 AL359265.2-201ENST00000434367 631 ntBASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 AL604028.2-201ENST00000437848 788 ntBASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 AC127537.2-201ENST00000439258 465 ntBASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 IPO7P1-201ENST00000442031 636 ntBASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 MTND5P22-201ENST00000458380 195 ntBASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 AC011476.1-201ENST00000466725 307 ntBASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 AC022730.1-201ENST00000473114 568 ntBASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 AC083904.1-201ENST00000487828 231 ntBASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 RPL21P42-201ENST00000488408 464 ntBASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 RAD21-204ENST00000518055 896 ntTSL 2 BASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 AL118558.2-201ENST00000556294 238 ntBASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 AC126323.4-201ENST00000566935 234 ntBASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 MIR3942-201ENST00000585264 109 ntBASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 AL513327.3-201ENST00000602618 469 ntBASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 CTHRC1P1-201ENST00000605383 469 ntBASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 AC133644.2-201ENST00000608142 540 ntBASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 AC015819.1-201ENST00000613588 663 ntBASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 AL353662.3-201ENST00000625131 237 ntBASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 183.9 ms