Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AL390119.1-201ENST00000440329 312 ntBASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 USP9YP8-201ENST00000441913 500 ntBASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 RPL17P49-201ENST00000443728 411 ntBASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 AL450996.1-201ENST00000445574 1202 ntBASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 AC005297.2-201ENST00000450430 606 ntBASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 PFN1P6-201ENST00000476786 399 ntBASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 RPSAP51-201ENST00000497462 645 ntBASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 AC006390.1-201ENST00000508068 283 ntBASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 AC093824.1-201ENST00000508796 343 ntBASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 RN7SKP82-201ENST00000516786 223 ntBASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 AC021678.3-201ENST00000517893 476 ntBASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 AC015720.2-201ENST00000567709 334 ntBASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 AC090615.1-201ENST00000577519 154 ntBASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 AC006504.3-201ENST00000586818 523 ntBASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 AL390208.1-201ENST00000605885 644 ntBASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 AC112204.3-201ENST00000623822 332 ntBASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 KPNA2P2-201ENST00000419546 1489 ntBASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 SAGE4P-201ENST00000442271 3381 ntBASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 FRG1BP-201ENST00000278882 761 ntBASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 NAP1L4P1-201ENST00000319092 1157 ntBASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 RNU1-19P-201ENST00000363306 165 ntBASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 Y_RNA.372-201ENST00000365599 102 ntBASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 RPS20P2-201ENST00000402520 389 ntBASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 AL356421.1-201ENST00000403255 413 ntBASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 ARL4AP5-201ENST00000404372 599 ntBASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 AL590002.1-201ENST00000406554 418 ntBASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 SPTLC1P2-201ENST00000407089 121 ntBASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 MIR1286-201ENST00000408112 78 ntBASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 SNX10-203ENST00000409367 746 ntTSL 5 BASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 RPL31P45-201ENST00000419532 356 ntBASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 Z99127.3-201ENST00000448158 395 ntBASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 AP1S2P1-201ENST00000457344 379 ntBASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 snoU13.8-201ENST00000458890 104 ntBASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 AC146507.1-201ENST00000468335 354 ntBASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 MTND1P3-201ENST00000484956 952 ntBASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 RPL32P33-201ENST00000487023 394 ntBASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 ARL2BPP6-201ENST00000512757 439 ntBASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 SCARNA15.1-201ENST00000516384 125 ntBASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 RNU6-201P-201ENST00000517100 61 ntBASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 AC022790.1-201ENST00000522872 204 ntBASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 AC092470.1-201ENST00000546187 132 ntBASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 AC068993.1-201ENST00000546724 589 ntBASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 AC011497.2-201ENST00000600255 639 ntBASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 AC007566.2-201ENST00000603642 413 ntBASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 AC018695.5-201ENST00000605872 315 ntBASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 AP003400.3-201ENST00000624904 346 ntBASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 MIR3688-2-201ENST00000636963 87 ntBASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 FAM157B-203ENST00000639350 358 ntBASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
NPAS4Q8IUM7 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
NPAS4Q8IUM7 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
NPAS4Q8IUM7 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.27□□□□□ -1.41
NPAS4Q8IUM7 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
NPAS4Q8IUM7 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC6.27□□□□□ -1.41
NPAS4Q8IUM7 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
NPAS4Q8IUM7 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms