Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC021146.8-201ENST00000507455 733 ntBASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 AL390334.1-201ENST00000556395 450 ntBASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 ACTR3BP3-201ENST00000565577 979 ntBASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 SNORD39.2-201ENST00000579995 76 ntBASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 ZNF415P1-201ENST00000582279 1166 ntBASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 RN7SL52P-201ENST00000584271 284 ntBASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 AC078795.2-201ENST00000602835 1252 ntBASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 AC018618.2-201ENST00000604770 446 ntBASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 RN7SKP299-201ENST00000606679 301 ntBASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 AP002360.3-201ENST00000607673 710 ntBASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 AL031667.3-201ENST00000620124 655 ntBASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 AC091953.3-201ENST00000623220 236 ntBASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 AP003072.4-201ENST00000624580 310 ntBASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 AC090582.1-201ENST00000636321 199 ntBASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 AL392088.2-201ENST00000637607 285 ntBASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 NACA3P-201ENST00000359690 648 ntBASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 Y_RNA.192-201ENST00000363977 102 ntBASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 snoZ40.1-201ENST00000364540 72 ntBASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 RNU6-549P-201ENST00000384433 107 ntBASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 Y_RNA.559-201ENST00000384686 107 ntBASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 RNA5SP372-201ENST00000390836 115 ntBASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 AL590084.2-201ENST00000401481 382 ntBASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 Z98745.1-201ENST00000402553 494 ntBASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 AL079342.2-201ENST00000403367 482 ntBASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 AL049697.2-201ENST00000403708 294 ntBASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 RPL21P108-201ENST00000413857 481 ntBASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 AC098592.1-201ENST00000419352 333 ntBASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 AC004448.2-201ENST00000422360 586 ntBASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 RPS24P1-201ENST00000438550 371 ntBASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 AL592437.1-201ENST00000443781 492 ntBASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 CDC42P1-201ENST00000456658 548 ntBASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 AC011979.1-201ENST00000472300 483 ntBASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 LINC00888-204ENST00000487386 421 ntBASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 AC084024.2-201ENST00000503480 791 ntBASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 AC112198.1-201ENST00000505369 1220 ntBASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 AC109927.2-201ENST00000506416 303 ntBASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 AC092851.1-201ENST00000535964 478 ntBASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 RSL24D1P11-201ENST00000591045 491 ntBASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 AP003465.2-201ENST00000602571 373 ntBASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 AC008966.2-201ENST00000606157 453 ntBASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 AC091979.2-201ENST00000607514 214 ntBASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 AP000254.1-201ENST00000609934 520 ntBASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 AC105227.2-201ENST00000615075 605 ntBASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 FP325313.1-201ENST00000638228 703 ntBASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 OR14L1P-202ENST00000641545 3009 ntBASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.5□□□□□ -1.69
ZNF549Q6P9A3 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms