Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 RNU1-85P-201ENST00000364127 164 ntBASIC5.93□□□□□ -1.46
PCDH1Q08174 RNU6-169P-201ENST00000365336 107 ntBASIC5.93□□□□□ -1.46
PCDH1Q08174 Y_RNA.384-201ENST00000383909 102 ntBASIC5.93□□□□□ -1.46
PCDH1Q08174 AL356967.1-201ENST00000406305 431 ntBASIC5.93□□□□□ -1.46
PCDH1Q08174 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.93□□□□□ -1.46
PCDH1Q08174 AC004987.3-201ENST00000413879 771 ntBASIC5.93□□□□□ -1.46
PCDH1Q08174 RPS7P15-201ENST00000415804 584 ntBASIC5.93□□□□□ -1.46
PCDH1Q08174 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.93□□□□□ -1.46
PCDH1Q08174 UQCRBP1-201ENST00000421129 336 ntBASIC5.93□□□□□ -1.46
PCDH1Q08174 RPL7AP51-201ENST00000422016 760 ntBASIC5.93□□□□□ -1.46
PCDH1Q08174 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC5.93□□□□□ -1.46
PCDH1Q08174 GPR143P-201ENST00000434155 205 ntBASIC5.93□□□□□ -1.46
PCDH1Q08174 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC5.93□□□□□ -1.46
PCDH1Q08174 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.93□□□□□ -1.46
PCDH1Q08174 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC5.93□□□□□ -1.46
PCDH1Q08174 AL445687.2-201ENST00000458156 728 ntBASIC5.93□□□□□ -1.46
PCDH1Q08174 SNRPCP3-201ENST00000474888 476 ntBASIC5.93□□□□□ -1.46
PCDH1Q08174 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.93□□□□□ -1.46
PCDH1Q08174 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC5.93□□□□□ -1.46
PCDH1Q08174 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC5.93□□□□□ -1.46
PCDH1Q08174 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.93□□□□□ -1.46
PCDH1Q08174 RN7SKP13-201ENST00000515933 244 ntBASIC5.93□□□□□ -1.46
PCDH1Q08174 AC022616.3-201ENST00000523940 148 ntBASIC5.93□□□□□ -1.46
PCDH1Q08174 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.93□□□□□ -1.46
PCDH1Q08174 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.93□□□□□ -1.46
PCDH1Q08174 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.93□□□□□ -1.46
PCDH1Q08174 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.93□□□□□ -1.46
PCDH1Q08174 AC090948.1-201ENST00000607464 549 ntBASIC5.93□□□□□ -1.46
PCDH1Q08174 BX323046.1-201ENST00000610145 535 ntBASIC5.93□□□□□ -1.46
PCDH1Q08174 MIR6823-201ENST00000622118 61 ntBASIC5.93□□□□□ -1.46
PCDH1Q08174 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.93□□□□□ -1.46
PCDH1Q08174 AC134882.1-201ENST00000603738 1676 ntBASIC5.93□□□□□ -1.46
PCDH1Q08174 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCDH1Q08174 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCDH1Q08174 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.93□□□□□ -1.46
PCDH1Q08174 ZNF652P1-201ENST00000442420 1309 ntBASIC5.93□□□□□ -1.46
PCDH1Q08174 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
PCDH1Q08174 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PCDH1Q08174 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCDH1Q08174 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCDH1Q08174 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
PCDH1Q08174 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDH1Q08174 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
PCDH1Q08174 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDH1Q08174 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.92□□□□□ -1.46
PCDH1Q08174 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDH1Q08174 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
PCDH1Q08174 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCDH1Q08174 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.92□□□□□ -1.46
PCDH1Q08174 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
PCDH1Q08174 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDH1Q08174 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.92□□□□□ -1.46
PCDH1Q08174 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDH1Q08174 RNY1P12-201ENST00000364251 105 ntBASIC5.92□□□□□ -1.46
PCDH1Q08174 RNU105B-201ENST00000364478 208 ntBASIC5.92□□□□□ -1.46
PCDH1Q08174 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.92□□□□□ -1.46
PCDH1Q08174 ARF4P3-201ENST00000397387 509 ntBASIC5.92□□□□□ -1.46
PCDH1Q08174 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDH1Q08174 OR4K12P-201ENST00000406538 961 ntBASIC5.92□□□□□ -1.46
PCDH1Q08174 AL133384.1-201ENST00000412744 351 ntBASIC5.92□□□□□ -1.46
PCDH1Q08174 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.92□□□□□ -1.46
PCDH1Q08174 PRELID3BP11-201ENST00000414230 479 ntBASIC5.92□□□□□ -1.46
PCDH1Q08174 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.92□□□□□ -1.46
PCDH1Q08174 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.92□□□□□ -1.46
PCDH1Q08174 RGS17P1-201ENST00000423358 553 ntBASIC5.92□□□□□ -1.46
PCDH1Q08174 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCDH1Q08174 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.92□□□□□ -1.46
PCDH1Q08174 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.92□□□□□ -1.46
PCDH1Q08174 RPL37P1-201ENST00000432310 284 ntBASIC5.92□□□□□ -1.46
PCDH1Q08174 AL731534.1-201ENST00000434711 269 ntBASIC5.92□□□□□ -1.46
PCDH1Q08174 IFNA20P-201ENST00000436840 528 ntBASIC5.92□□□□□ -1.46
PCDH1Q08174 OR3D1P-201ENST00000438288 955 ntBASIC5.92□□□□□ -1.46
PCDH1Q08174 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC5.92□□□□□ -1.46
PCDH1Q08174 AC005229.2-201ENST00000456995 399 ntBASIC5.92□□□□□ -1.46
PCDH1Q08174 APOOP2-201ENST00000461561 539 ntBASIC5.92□□□□□ -1.46
PCDH1Q08174 AC098818.1-201ENST00000478593 252 ntBASIC5.92□□□□□ -1.46
PCDH1Q08174 RPL7AP10-201ENST00000481016 791 ntBASIC5.92□□□□□ -1.46
PCDH1Q08174 AC233702.1-201ENST00000482905 502 ntBASIC5.92□□□□□ -1.46
PCDH1Q08174 RPL38P4-201ENST00000502376 214 ntBASIC5.92□□□□□ -1.46
PCDH1Q08174 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.92□□□□□ -1.46
PCDH1Q08174 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC5.92□□□□□ -1.46
PCDH1Q08174 Y_RNA.710-201ENST00000516975 110 ntBASIC5.92□□□□□ -1.46
PCDH1Q08174 AC116917.1-201ENST00000520558 305 ntBASIC5.92□□□□□ -1.46
PCDH1Q08174 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.92□□□□□ -1.46
PCDH1Q08174 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC5.92□□□□□ -1.46
PCDH1Q08174 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.92□□□□□ -1.46
PCDH1Q08174 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.92□□□□□ -1.46
PCDH1Q08174 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.92□□□□□ -1.46
PCDH1Q08174 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCDH1Q08174 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.92□□□□□ -1.46
PCDH1Q08174 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.92□□□□□ -1.46
PCDH1Q08174 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC5.92□□□□□ -1.46
PCDH1Q08174 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.92□□□□□ -1.46
PCDH1Q08174 AC011500.1-201ENST00000601963 469 ntBASIC5.92□□□□□ -1.46
PCDH1Q08174 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.92□□□□□ -1.46
PCDH1Q08174 RN7SL261P-201ENST00000613441 282 ntBASIC5.92□□□□□ -1.46
PCDH1Q08174 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.92□□□□□ -1.46
PCDH1Q08174 AC008121.3-201ENST00000618726 433 ntBASIC5.92□□□□□ -1.46
PCDH1Q08174 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.92□□□□□ -1.46
PCDH1Q08174 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms