Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 SLC25A36P1-201ENST00000590111 465 ntBASIC2.13□□□□□ -2.07
HSPG2P98160 ACTR3BP1-201ENST00000605584 1247 ntBASIC2.13□□□□□ -2.07
HSPG2P98160 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
HSPG2P98160 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.13□□□□□ -2.07
HSPG2P98160 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
HSPG2P98160 AC138393.1-206ENST00000540997 1886 ntBASIC2.13□□□□□ -2.07
HSPG2P98160 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
HSPG2P98160 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
HSPG2P98160 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
HSPG2P98160 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
HSPG2P98160 TNPO1P3-201ENST00000436471 2662 ntBASIC2.13□□□□□ -2.07
HSPG2P98160 HMGN1P24-201ENST00000412282 298 ntBASIC2.13□□□□□ -2.07
HSPG2P98160 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.13□□□□□ -2.07
HSPG2P98160 CBX1P4-201ENST00000439415 457 ntBASIC2.13□□□□□ -2.07
HSPG2P98160 ATP6V1G1P6-201ENST00000504007 334 ntBASIC2.13□□□□□ -2.07
HSPG2P98160 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC2.13□□□□□ -2.07
HSPG2P98160 AC023161.2-201ENST00000551218 780 ntBASIC2.13□□□□□ -2.07
HSPG2P98160 AC027281.1-201ENST00000574178 758 ntBASIC2.13□□□□□ -2.07
HSPG2P98160 AC090312.2-201ENST00000582687 378 ntBASIC2.13□□□□□ -2.07
HSPG2P98160 AC105227.2-201ENST00000615075 605 ntBASIC2.13□□□□□ -2.07
HSPG2P98160 AC231759.1-201ENST00000616455 597 ntBASIC2.13□□□□□ -2.07
HSPG2P98160 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC2.13□□□□□ -2.07
HSPG2P98160 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
HSPG2P98160 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC2.13□□□□□ -2.07
HSPG2P98160 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
HSPG2P98160 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
HSPG2P98160 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC2.13□□□□□ -2.07
HSPG2P98160 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
HSPG2P98160 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.13□□□□□ -2.07
HSPG2P98160 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC2.13□□□□□ -2.07
HSPG2P98160 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.13□□□□□ -2.07
HSPG2P98160 RPS4XP2-201ENST00000458402 793 ntBASIC2.13□□□□□ -2.07
HSPG2P98160 S100A11P1-201ENST00000477525 312 ntBASIC2.13□□□□□ -2.07
HSPG2P98160 AC109925.1-201ENST00000478069 331 ntBASIC2.13□□□□□ -2.07
HSPG2P98160 ATP5F1P5-201ENST00000526403 760 ntBASIC2.13□□□□□ -2.07
HSPG2P98160 AC026333.2-201ENST00000542164 106 ntBASIC2.13□□□□□ -2.07
HSPG2P98160 AC067852.4-201ENST00000590314 478 ntBASIC2.13□□□□□ -2.07
HSPG2P98160 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC2.13□□□□□ -2.07
HSPG2P98160 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
HSPG2P98160 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
HSPG2P98160 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
HSPG2P98160 MAPK10-286ENST00000641208 8747 ntBASIC2.13□□□□□ -2.07
HSPG2P98160 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
HSPG2P98160 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
HSPG2P98160 RPL7AP73-201ENST00000413490 353 ntBASIC2.12□□□□□ -2.07
HSPG2P98160 AC009963.1-201ENST00000417265 157 ntBASIC2.12□□□□□ -2.07
HSPG2P98160 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.12□□□□□ -2.07
HSPG2P98160 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.12□□□□□ -2.07
HSPG2P98160 AC073335.1-201ENST00000427776 363 ntBASIC2.12□□□□□ -2.07
HSPG2P98160 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC2.12□□□□□ -2.07
HSPG2P98160 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HSPG2P98160 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC2.12□□□□□ -2.07
HSPG2P98160 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC2.12□□□□□ -2.07
HSPG2P98160 AC018692.3-201ENST00000623929 123 ntBASIC2.12□□□□□ -2.07
HSPG2P98160 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HSPG2P98160 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HSPG2P98160 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC2.12□□□□□ -2.07
HSPG2P98160 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
HSPG2P98160 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
HSPG2P98160 PRELID3BP10-201ENST00000431957 584 ntBASIC2.12□□□□□ -2.07
HSPG2P98160 AC140076.1-201ENST00000449897 361 ntBASIC2.12□□□□□ -2.07
HSPG2P98160 RPL7P47-201ENST00000497299 556 ntBASIC2.12□□□□□ -2.07
HSPG2P98160 RNU6-991P-201ENST00000516168 107 ntBASIC2.12□□□□□ -2.07
HSPG2P98160 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC2.12□□□□□ -2.07
HSPG2P98160 TBCA-206ENST00000518338 551 ntTSL 2 BASIC2.12□□□□□ -2.07
HSPG2P98160 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.12□□□□□ -2.07
HSPG2P98160 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC2.12□□□□□ -2.07
HSPG2P98160 OR51C1P-201ENST00000608504 942 ntBASIC2.12□□□□□ -2.07
HSPG2P98160 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HSPG2P98160 Z95327.2-201ENST00000414579 1873 ntBASIC2.12□□□□□ -2.07
HSPG2P98160 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
HSPG2P98160 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC2.12□□□□□ -2.07
HSPG2P98160 RPS29P31-201ENST00000446147 164 ntBASIC2.12□□□□□ -2.07
HSPG2P98160 RPS29P26-201ENST00000477483 171 ntBASIC2.12□□□□□ -2.07
HSPG2P98160 AC021678.1-201ENST00000505195 936 ntBASIC2.12□□□□□ -2.07
HSPG2P98160 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC2.12□□□□□ -2.07
HSPG2P98160 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.12□□□□□ -2.07
HSPG2P98160 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.12□□□□□ -2.07
HSPG2P98160 Z95114.1-201ENST00000624264 14574 ntBASIC2.12□□□□□ -2.07
HSPG2P98160 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC2.12□□□□□ -2.07
HSPG2P98160 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HSPG2P98160 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HSPG2P98160 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC2.12□□□□□ -2.07
HSPG2P98160 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC2.12□□□□□ -2.07
HSPG2P98160 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HSPG2P98160 DMD-228ENST00000541735 7080 ntTSL 5 BASIC2.12□□□□□ -2.07
HSPG2P98160 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HSPG2P98160 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HSPG2P98160 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HSPG2P98160 SEPT7P8-201ENST00000413308 775 ntBASIC2.12□□□□□ -2.07
HSPG2P98160 EIF4EP1-201ENST00000422311 642 ntBASIC2.12□□□□□ -2.07
HSPG2P98160 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC2.12□□□□□ -2.07
HSPG2P98160 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HSPG2P98160 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC2.12□□□□□ -2.07
HSPG2P98160 MIR2682-201ENST00000580305 110 ntBASIC2.12□□□□□ -2.07
HSPG2P98160 AC006557.5-201ENST00000603126 811 ntBASIC2.12□□□□□ -2.07
HSPG2P98160 AC012603.1-201ENST00000606424 528 ntBASIC2.12□□□□□ -2.07
HSPG2P98160 AC127502.3-201ENST00000636170 1206 ntBASIC2.12□□□□□ -2.07
HSPG2P98160 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC2.12□□□□□ -2.07
HSPG2P98160 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms