Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.39□□□□□ -1.87
H3F3AP84243 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
H3F3AP84243 MIR5685-201ENST00000579080 79 ntBASIC3.39□□□□□ -1.87
H3F3AP84243 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.39□□□□□ -1.87
H3F3AP84243 RNU1-30P-201ENST00000606575 163 ntBASIC3.39□□□□□ -1.87
H3F3AP84243 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.39□□□□□ -1.87
H3F3AP84243 MIR6798-201ENST00000612887 67 ntBASIC3.39□□□□□ -1.87
H3F3AP84243 AC079684.1-201ENST00000621405 437 ntBASIC3.39□□□□□ -1.87
H3F3AP84243 AC100871.1-201ENST00000507871 1456 ntBASIC3.39□□□□□ -1.87
H3F3AP84243 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
H3F3AP84243 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.39□□□□□ -1.87
H3F3AP84243 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.39□□□□□ -1.87
H3F3AP84243 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
H3F3AP84243 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
H3F3AP84243 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.38□□□□□ -1.87
H3F3AP84243 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
H3F3AP84243 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
H3F3AP84243 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
H3F3AP84243 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
H3F3AP84243 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
H3F3AP84243 MIR124-3-201ENST00000384866 87 ntBASIC3.38□□□□□ -1.87
H3F3AP84243 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
H3F3AP84243 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
H3F3AP84243 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.38□□□□□ -1.87
H3F3AP84243 AL691447.1-201ENST00000419456 387 ntBASIC3.38□□□□□ -1.87
H3F3AP84243 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.38□□□□□ -1.87
H3F3AP84243 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.38□□□□□ -1.87
H3F3AP84243 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.38□□□□□ -1.87
H3F3AP84243 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.38□□□□□ -1.87
H3F3AP84243 RPS29P7-201ENST00000439662 171 ntBASIC3.38□□□□□ -1.87
H3F3AP84243 AC006480.1-201ENST00000449887 378 ntBASIC3.38□□□□□ -1.87
H3F3AP84243 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.38□□□□□ -1.87
H3F3AP84243 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.38□□□□□ -1.87
H3F3AP84243 AC021146.1-201ENST00000511202 716 ntBASIC3.38□□□□□ -1.87
H3F3AP84243 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.38□□□□□ -1.87
H3F3AP84243 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC3.38□□□□□ -1.87
H3F3AP84243 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC3.38□□□□□ -1.87
H3F3AP84243 AL161713.1-201ENST00000555538 145 ntBASIC3.38□□□□□ -1.87
H3F3AP84243 AC087499.8-201ENST00000578406 226 ntBASIC3.38□□□□□ -1.87
H3F3AP84243 MIR5187-201ENST00000583479 76 ntBASIC3.38□□□□□ -1.87
H3F3AP84243 EIF1P6-201ENST00000600054 334 ntBASIC3.38□□□□□ -1.87
H3F3AP84243 AC084373.1-201ENST00000603311 235 ntBASIC3.38□□□□□ -1.87
H3F3AP84243 AC016957.2-201ENST00000616998 848 ntBASIC3.38□□□□□ -1.87
H3F3AP84243 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.38□□□□□ -1.87
H3F3AP84243 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.38□□□□□ -1.87
H3F3AP84243 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.38□□□□□ -1.87
H3F3AP84243 AL139811.1-201ENST00000424779 2299 ntBASIC3.38□□□□□ -1.87
H3F3AP84243 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
H3F3AP84243 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.38□□□□□ -1.87
H3F3AP84243 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.38□□□□□ -1.87
H3F3AP84243 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.38□□□□□ -1.87
H3F3AP84243 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.38□□□□□ -1.87
H3F3AP84243 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
H3F3AP84243 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
H3F3AP84243 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
H3F3AP84243 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
H3F3AP84243 AL353746.1-201ENST00000566293 6881 ntBASIC3.37□□□□□ -1.87
H3F3AP84243 AP004289.2-201ENST00000444413 1457 ntBASIC3.37□□□□□ -1.87
H3F3AP84243 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
H3F3AP84243 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
H3F3AP84243 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
H3F3AP84243 AL356967.1-201ENST00000406305 431 ntBASIC3.37□□□□□ -1.87
H3F3AP84243 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.37□□□□□ -1.87
H3F3AP84243 AL159169.1-201ENST00000421119 127 ntBASIC3.37□□□□□ -1.87
H3F3AP84243 AC092832.1-201ENST00000422934 400 ntBASIC3.37□□□□□ -1.87
H3F3AP84243 RPL30P3-201ENST00000424262 333 ntBASIC3.37□□□□□ -1.87
H3F3AP84243 HIGD1AP12-201ENST00000427832 281 ntBASIC3.37□□□□□ -1.87
H3F3AP84243 HMGB3P5-201ENST00000428894 612 ntBASIC3.37□□□□□ -1.87
H3F3AP84243 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.37□□□□□ -1.87
H3F3AP84243 AC092809.1-201ENST00000441469 474 ntBASIC3.37□□□□□ -1.87
H3F3AP84243 SETD6P1-201ENST00000444575 317 ntBASIC3.37□□□□□ -1.87
H3F3AP84243 RAB28P3-201ENST00000448325 597 ntBASIC3.37□□□□□ -1.87
H3F3AP84243 NANOGP10-201ENST00000453325 895 ntBASIC3.37□□□□□ -1.87
H3F3AP84243 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.37□□□□□ -1.87
H3F3AP84243 MTCO3P20-201ENST00000454926 688 ntBASIC3.37□□□□□ -1.87
H3F3AP84243 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.37□□□□□ -1.87
H3F3AP84243 AL133162.1-201ENST00000463228 453 ntBASIC3.37□□□□□ -1.87
H3F3AP84243 AC010307.1-201ENST00000467206 836 ntBASIC3.37□□□□□ -1.87
H3F3AP84243 AC018635.1-201ENST00000468292 1030 ntBASIC3.37□□□□□ -1.87
H3F3AP84243 AC022034.3-201ENST00000471393 478 ntBASIC3.37□□□□□ -1.87
H3F3AP84243 AC087385.1-201ENST00000475062 312 ntBASIC3.37□□□□□ -1.87
H3F3AP84243 GAPDHP36-201ENST00000480688 918 ntBASIC3.37□□□□□ -1.87
H3F3AP84243 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.37□□□□□ -1.87
H3F3AP84243 BTF3L4P4-201ENST00000506381 449 ntBASIC3.37□□□□□ -1.87
H3F3AP84243 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.37□□□□□ -1.87
H3F3AP84243 AC093853.1-201ENST00000515689 483 ntBASIC3.37□□□□□ -1.87
H3F3AP84243 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.37□□□□□ -1.87
H3F3AP84243 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.37□□□□□ -1.87
H3F3AP84243 AC022695.1-201ENST00000522089 237 ntBASIC3.37□□□□□ -1.87
H3F3AP84243 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.37□□□□□ -1.87
H3F3AP84243 AC006960.3-201ENST00000561845 705 ntBASIC3.37□□□□□ -1.87
H3F3AP84243 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.37□□□□□ -1.87
H3F3AP84243 SS18L2P2-201ENST00000583960 235 ntBASIC3.37□□□□□ -1.87
H3F3AP84243 AC093227.2-201ENST00000589357 285 ntBASIC3.37□□□□□ -1.87
H3F3AP84243 BMS1P7-201ENST00000602440 1052 ntBASIC3.37□□□□□ -1.87
H3F3AP84243 AL049634.3-201ENST00000604968 457 ntBASIC3.37□□□□□ -1.87
H3F3AP84243 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.37□□□□□ -1.87
H3F3AP84243 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.37□□□□□ -1.87
H3F3AP84243 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.37□□□□□ -1.87
H3F3AP84243 AC005344.1-201ENST00000613391 459 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 182.5 ms