Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC008562.1-201ENST00000521763 330 ntBASIC4.12□□□□□ -1.75
CDH11P55287 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.12□□□□□ -1.75
CDH11P55287 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.12□□□□□ -1.75
CDH11P55287 AL110118.1-201ENST00000553543 400 ntBASIC4.12□□□□□ -1.75
CDH11P55287 NIFKP8-201ENST00000560500 874 ntBASIC4.12□□□□□ -1.75
CDH11P55287 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.12□□□□□ -1.75
CDH11P55287 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.12□□□□□ -1.75
CDH11P55287 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.12□□□□□ -1.75
CDH11P55287 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.12□□□□□ -1.75
CDH11P55287 AC068790.7-201ENST00000602347 528 ntBASIC4.12□□□□□ -1.75
CDH11P55287 AC068790.4-201ENST00000602474 263 ntBASIC4.12□□□□□ -1.75
CDH11P55287 AC103792.1-201ENST00000603591 919 ntBASIC4.12□□□□□ -1.75
CDH11P55287 MTND3P19-201ENST00000603825 345 ntBASIC4.12□□□□□ -1.75
CDH11P55287 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.12□□□□□ -1.75
CDH11P55287 AC107952.2-201ENST00000606048 486 ntBASIC4.12□□□□□ -1.75
CDH11P55287 AP002360.3-201ENST00000607673 710 ntBASIC4.12□□□□□ -1.75
CDH11P55287 AC011330.2-201ENST00000621680 635 ntBASIC4.12□□□□□ -1.75
CDH11P55287 AC109454.4-201ENST00000623411 649 ntBASIC4.12□□□□□ -1.75
CDH11P55287 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.12□□□□□ -1.75
CDH11P55287 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CDH11P55287 AC018529.3-201ENST00000624212 2254 ntBASIC4.12□□□□□ -1.75
CDH11P55287 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CDH11P55287 AC093535.2-201ENST00000624769 2326 ntBASIC4.12□□□□□ -1.75
CDH11P55287 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDH11P55287 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CDH11P55287 AC025263.3-201ENST00000622965 1396 ntBASIC4.12□□□□□ -1.75
CDH11P55287 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CDH11P55287 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDH11P55287 AC022031.1-201ENST00000585985 2593 ntBASIC4.11□□□□□ -1.75
CDH11P55287 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.11□□□□□ -1.75
CDH11P55287 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDH11P55287 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CDH11P55287 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CDH11P55287 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDH11P55287 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.11□□□□□ -1.75
CDH11P55287 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.11□□□□□ -1.75
CDH11P55287 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDH11P55287 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.11□□□□□ -1.75
CDH11P55287 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CDH11P55287 AC067945.1-201ENST00000342609 618 ntBASIC4.11□□□□□ -1.75
CDH11P55287 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.11□□□□□ -1.75
CDH11P55287 RNU4-92P-201ENST00000363783 136 ntBASIC4.11□□□□□ -1.75
CDH11P55287 RNU1-32P-201ENST00000363937 159 ntBASIC4.11□□□□□ -1.75
CDH11P55287 RNU6-619P-201ENST00000365146 108 ntBASIC4.11□□□□□ -1.75
CDH11P55287 OR1L1-202ENST00000373686 1083 ntBASIC4.11□□□□□ -1.75
CDH11P55287 RNU1-63P-201ENST00000383902 164 ntBASIC4.11□□□□□ -1.75
CDH11P55287 MTND4P13-201ENST00000402078 1023 ntBASIC4.11□□□□□ -1.75
CDH11P55287 RPL23AP48-201ENST00000406913 488 ntBASIC4.11□□□□□ -1.75
CDH11P55287 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CDH11P55287 HIGD1AP15-201ENST00000416198 280 ntBASIC4.11□□□□□ -1.75
CDH11P55287 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH11P55287 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDH11P55287 HIGD1AP12-201ENST00000427832 281 ntBASIC4.11□□□□□ -1.75
CDH11P55287 CNOT7P1-201ENST00000429006 852 ntBASIC4.11□□□□□ -1.75
CDH11P55287 SKP1P3-201ENST00000429280 487 ntBASIC4.11□□□□□ -1.75
CDH11P55287 AC068287.1-201ENST00000430283 295 ntBASIC4.11□□□□□ -1.75
CDH11P55287 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.11□□□□□ -1.75
CDH11P55287 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.11□□□□□ -1.75
CDH11P55287 AC069285.2-201ENST00000440210 275 ntBASIC4.11□□□□□ -1.75
CDH11P55287 GEMIN8P3-201ENST00000445417 720 ntBASIC4.11□□□□□ -1.75
CDH11P55287 ARL2BPP10-201ENST00000446487 531 ntBASIC4.11□□□□□ -1.75
CDH11P55287 NPM1P13-201ENST00000452663 865 ntBASIC4.11□□□□□ -1.75
CDH11P55287 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH11P55287 MRPL42P4-201ENST00000453267 443 ntBASIC4.11□□□□□ -1.75
CDH11P55287 RPL10P17-201ENST00000453852 316 ntBASIC4.11□□□□□ -1.75
CDH11P55287 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH11P55287 ISCUP1-201ENST00000454451 448 ntBASIC4.11□□□□□ -1.75
CDH11P55287 CCDC75P1-201ENST00000469247 791 ntBASIC4.11□□□□□ -1.75
CDH11P55287 PRELID3BP5-201ENST00000508612 460 ntBASIC4.11□□□□□ -1.75
CDH11P55287 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CDH11P55287 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH11P55287 AC108043.1-201ENST00000512696 574 ntBASIC4.11□□□□□ -1.75
CDH11P55287 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.11□□□□□ -1.75
CDH11P55287 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH11P55287 RN7SKP92-201ENST00000517266 244 ntBASIC4.11□□□□□ -1.75
CDH11P55287 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH11P55287 COX6B1P6-201ENST00000522347 255 ntBASIC4.11□□□□□ -1.75
CDH11P55287 OR5M2P-201ENST00000529003 936 ntBASIC4.11□□□□□ -1.75
CDH11P55287 MTCO2P15-201ENST00000532655 656 ntBASIC4.11□□□□□ -1.75
CDH11P55287 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH11P55287 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH11P55287 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.11□□□□□ -1.75
CDH11P55287 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC4.11□□□□□ -1.75
CDH11P55287 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH11P55287 AC090888.2-201ENST00000559765 1144 ntBASIC4.11□□□□□ -1.75
CDH11P55287 HMGB3P26-201ENST00000560051 582 ntBASIC4.11□□□□□ -1.75
CDH11P55287 MTND3P13-201ENST00000574391 343 ntBASIC4.11□□□□□ -1.75
CDH11P55287 RN7SL690P-201ENST00000582087 240 ntBASIC4.11□□□□□ -1.75
CDH11P55287 AC115085.1-201ENST00000588924 229 ntBASIC4.11□□□□□ -1.75
CDH11P55287 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.11□□□□□ -1.75
CDH11P55287 VN1R83P-201ENST00000595685 445 ntBASIC4.11□□□□□ -1.75
CDH11P55287 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH11P55287 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH11P55287 AL020997.3-201ENST00000602843 359 ntBASIC4.11□□□□□ -1.75
CDH11P55287 AP000238.1-201ENST00000608759 426 ntBASIC4.11□□□□□ -1.75
CDH11P55287 AP005137.2-201ENST00000609238 400 ntBASIC4.11□□□□□ -1.75
CDH11P55287 SNX18P1Y-201ENST00000616231 511 ntBASIC4.11□□□□□ -1.75
CDH11P55287 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH11P55287 AC018926.3-201ENST00000618841 406 ntBASIC4.11□□□□□ -1.75
CDH11P55287 AP000676.4-201ENST00000624659 623 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms