Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
LIMK1P53667 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LIMK1P53667 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.48□□□□□ -1.69
LIMK1P53667 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
LIMK1P53667 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
LIMK1P53667 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.48□□□□□ -1.69
LIMK1P53667 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.48□□□□□ -1.69
LIMK1P53667 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LIMK1P53667 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LIMK1P53667 MIR195-201ENST00000385194 87 ntBASIC4.48□□□□□ -1.69
LIMK1P53667 AL121834.1-202ENST00000404494 277 ntBASIC4.48□□□□□ -1.69
LIMK1P53667 CYCSP19-201ENST00000411715 316 ntBASIC4.48□□□□□ -1.69
LIMK1P53667 CRYBB2P1-203ENST00000415709 538 ntBASIC4.48□□□□□ -1.69
LIMK1P53667 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.48□□□□□ -1.69
LIMK1P53667 QRSL1P2-201ENST00000418582 964 ntBASIC4.48□□□□□ -1.69
LIMK1P53667 HMGB3P5-201ENST00000428894 612 ntBASIC4.48□□□□□ -1.69
LIMK1P53667 MTCO1P54-201ENST00000430139 712 ntBASIC4.48□□□□□ -1.69
LIMK1P53667 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.48□□□□□ -1.69
LIMK1P53667 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.48□□□□□ -1.69
LIMK1P53667 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.48□□□□□ -1.69
LIMK1P53667 SDR42E1P3-201ENST00000438345 502 ntBASIC4.48□□□□□ -1.69
LIMK1P53667 UBE2V1P5-201ENST00000440070 405 ntBASIC4.48□□□□□ -1.69
LIMK1P53667 YWHAQP9-201ENST00000445891 512 ntBASIC4.48□□□□□ -1.69
LIMK1P53667 PPIAP3-201ENST00000450588 505 ntBASIC4.48□□□□□ -1.69
LIMK1P53667 AC005008.1-201ENST00000456151 612 ntBASIC4.48□□□□□ -1.69
LIMK1P53667 GTF2IP12-201ENST00000456547 356 ntBASIC4.48□□□□□ -1.69
LIMK1P53667 AC090142.1-201ENST00000465776 462 ntBASIC4.48□□□□□ -1.69
LIMK1P53667 RPL23AP37-201ENST00000479658 549 ntBASIC4.48□□□□□ -1.69
LIMK1P53667 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
LIMK1P53667 AC041039.1-201ENST00000485656 536 ntBASIC4.48□□□□□ -1.69
LIMK1P53667 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.48□□□□□ -1.69
LIMK1P53667 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.48□□□□□ -1.69
LIMK1P53667 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.48□□□□□ -1.69
LIMK1P53667 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.48□□□□□ -1.69
LIMK1P53667 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LIMK1P53667 FTH1P9-201ENST00000513251 355 ntBASIC4.48□□□□□ -1.69
LIMK1P53667 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.48□□□□□ -1.69
LIMK1P53667 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.48□□□□□ -1.69
LIMK1P53667 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.48□□□□□ -1.69
LIMK1P53667 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.48□□□□□ -1.69
LIMK1P53667 RPL21P7-201ENST00000557463 483 ntBASIC4.48□□□□□ -1.69
LIMK1P53667 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LIMK1P53667 AP000919.1-202ENST00000581139 1264 ntBASIC4.48□□□□□ -1.69
LIMK1P53667 AC090312.2-201ENST00000582687 378 ntBASIC4.48□□□□□ -1.69
LIMK1P53667 AP001160.4-201ENST00000596971 382 ntBASIC4.48□□□□□ -1.69
LIMK1P53667 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.48□□□□□ -1.69
LIMK1P53667 EIF1P6-201ENST00000600054 334 ntBASIC4.48□□□□□ -1.69
LIMK1P53667 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.48□□□□□ -1.69
LIMK1P53667 AC133794.1-201ENST00000602731 914 ntBASIC4.48□□□□□ -1.69
LIMK1P53667 BNIP3P11-201ENST00000603878 563 ntBASIC4.48□□□□□ -1.69
LIMK1P53667 AC078899.5-201ENST00000612475 178 ntBASIC4.48□□□□□ -1.69
LIMK1P53667 AL713922.2-201ENST00000619384 716 ntBASIC4.48□□□□□ -1.69
LIMK1P53667 MIR8059-201ENST00000620427 81 ntBASIC4.48□□□□□ -1.69
LIMK1P53667 AC112484.5-201ENST00000624189 228 ntBASIC4.48□□□□□ -1.69
LIMK1P53667 CDRT1-208ENST00000630868 794 ntBASIC4.48□□□□□ -1.69
LIMK1P53667 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LIMK1P53667 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.48□□□□□ -1.69
LIMK1P53667 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.48□□□□□ -1.69
LIMK1P53667 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.48□□□□□ -1.69
LIMK1P53667 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LIMK1P53667 ZNF849P-201ENST00000594711 1566 ntBASIC4.48□□□□□ -1.69
LIMK1P53667 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LIMK1P53667 AC104446.1-201ENST00000613728 1321 ntBASIC4.47□□□□□ -1.69
LIMK1P53667 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.47□□□□□ -1.69
LIMK1P53667 AC105074.1-201ENST00000623380 3095 ntBASIC4.47□□□□□ -1.69
LIMK1P53667 AC073055.1-201ENST00000456901 1621 ntBASIC4.47□□□□□ -1.69
LIMK1P53667 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.47□□□□□ -1.69
LIMK1P53667 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
LIMK1P53667 OR5P1P-201ENST00000299512 925 ntBASIC4.47□□□□□ -1.69
LIMK1P53667 SNORA71.3-201ENST00000362582 128 ntBASIC4.47□□□□□ -1.69
LIMK1P53667 RNA5SP283-201ENST00000365604 119 ntBASIC4.47□□□□□ -1.69
LIMK1P53667 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LIMK1P53667 RNU6-207P-201ENST00000384137 107 ntBASIC4.47□□□□□ -1.69
LIMK1P53667 MIR3074-201ENST00000384885 81 ntBASIC4.47□□□□□ -1.69
LIMK1P53667 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.47□□□□□ -1.69
LIMK1P53667 YWHAEP5-201ENST00000431545 765 ntBASIC4.47□□□□□ -1.69
LIMK1P53667 AC092162.1-201ENST00000432828 434 ntBASIC4.47□□□□□ -1.69
LIMK1P53667 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
LIMK1P53667 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.47□□□□□ -1.69
LIMK1P53667 DNAJC19P8-201ENST00000452887 259 ntBASIC4.47□□□□□ -1.69
LIMK1P53667 RPL21P18-201ENST00000469899 480 ntBASIC4.47□□□□□ -1.69
LIMK1P53667 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.47□□□□□ -1.69
LIMK1P53667 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.47□□□□□ -1.69
LIMK1P53667 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.47□□□□□ -1.69
LIMK1P53667 HPRT1P2-201ENST00000505250 544 ntBASIC4.47□□□□□ -1.69
LIMK1P53667 SNX5P1-201ENST00000505757 1041 ntBASIC4.47□□□□□ -1.69
LIMK1P53667 AC108475.1-201ENST00000507880 950 ntBASIC4.47□□□□□ -1.69
LIMK1P53667 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.47□□□□□ -1.69
LIMK1P53667 AC006499.6-201ENST00000511169 607 ntBASIC4.47□□□□□ -1.69
LIMK1P53667 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.47□□□□□ -1.69
LIMK1P53667 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.47□□□□□ -1.69
LIMK1P53667 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.47□□□□□ -1.69
LIMK1P53667 VN1R79P-201ENST00000593540 513 ntBASIC4.47□□□□□ -1.69
LIMK1P53667 AL451086.1-201ENST00000605596 223 ntBASIC4.47□□□□□ -1.69
LIMK1P53667 AC026368.1-201ENST00000614934 690 ntBASIC4.47□□□□□ -1.69
LIMK1P53667 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.47□□□□□ -1.69
LIMK1P53667 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.47□□□□□ -1.69
LIMK1P53667 AC006927.2-201ENST00000639256 389 ntBASIC4.47□□□□□ -1.69
LIMK1P53667 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
LIMK1P53667 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms