Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.79□□□□□ -1.48
MRE11P49959 AC073544.2-201ENST00000601155 540 ntBASIC5.79□□□□□ -1.48
MRE11P49959 AC073648.5-201ENST00000603502 305 ntBASIC5.79□□□□□ -1.48
MRE11P49959 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.79□□□□□ -1.48
MRE11P49959 AL161616.1-201ENST00000611867 286 ntBASIC5.79□□□□□ -1.48
MRE11P49959 AC073534.2-201ENST00000620377 381 ntBASIC5.79□□□□□ -1.48
MRE11P49959 AC011815.3-201ENST00000624194 473 ntBASIC5.79□□□□□ -1.48
MRE11P49959 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.79□□□□□ -1.48
MRE11P49959 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC5.79□□□□□ -1.48
MRE11P49959 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.79□□□□□ -1.48
MRE11P49959 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.79□□□□□ -1.48
MRE11P49959 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
MRE11P49959 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.79□□□□□ -1.48
MRE11P49959 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.79□□□□□ -1.48
MRE11P49959 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
MRE11P49959 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
MRE11P49959 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
MRE11P49959 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
MRE11P49959 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
MRE11P49959 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.78□□□□□ -1.48
MRE11P49959 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
MRE11P49959 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.78□□□□□ -1.48
MRE11P49959 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.78□□□□□ -1.48
MRE11P49959 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
MRE11P49959 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
MRE11P49959 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
MRE11P49959 OR56B2P-201ENST00000317102 954 ntBASIC5.78□□□□□ -1.48
MRE11P49959 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.78□□□□□ -1.48
MRE11P49959 SNORA16A-201ENST00000384342 137 ntBASIC5.78□□□□□ -1.48
MRE11P49959 Y_RNA.553-201ENST00000384670 102 ntBASIC5.78□□□□□ -1.48
MRE11P49959 AL049693.1-201ENST00000402760 611 ntBASIC5.78□□□□□ -1.48
MRE11P49959 HDGFP1-201ENST00000405943 252 ntBASIC5.78□□□□□ -1.48
MRE11P49959 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.78□□□□□ -1.48
MRE11P49959 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.78□□□□□ -1.48
MRE11P49959 RPL21P43-201ENST00000425440 472 ntBASIC5.78□□□□□ -1.48
MRE11P49959 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.78□□□□□ -1.48
MRE11P49959 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC5.78□□□□□ -1.48
MRE11P49959 RPS24P1-201ENST00000438550 371 ntBASIC5.78□□□□□ -1.48
MRE11P49959 MTND2P20-201ENST00000440805 661 ntBASIC5.78□□□□□ -1.48
MRE11P49959 MTND3P1-201ENST00000441336 220 ntBASIC5.78□□□□□ -1.48
MRE11P49959 AL591503.2-201ENST00000442314 1005 ntBASIC5.78□□□□□ -1.48
MRE11P49959 MTND4P18-201ENST00000447010 465 ntBASIC5.78□□□□□ -1.48
MRE11P49959 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.78□□□□□ -1.48
MRE11P49959 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.78□□□□□ -1.48
MRE11P49959 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.78□□□□□ -1.48
MRE11P49959 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.78□□□□□ -1.48
MRE11P49959 IGLV2-34-201ENST00000490007 283 ntBASIC5.78□□□□□ -1.48
MRE11P49959 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.78□□□□□ -1.48
MRE11P49959 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.78□□□□□ -1.48
MRE11P49959 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.78□□□□□ -1.48
MRE11P49959 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC5.78□□□□□ -1.48
MRE11P49959 AC005178.1-201ENST00000508392 440 ntBASIC5.78□□□□□ -1.48
MRE11P49959 HMGB1P44-201ENST00000508597 572 ntBASIC5.78□□□□□ -1.48
MRE11P49959 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.78□□□□□ -1.48
MRE11P49959 PRELID3BP4-201ENST00000515476 571 ntBASIC5.78□□□□□ -1.48
MRE11P49959 Y_RNA.695-201ENST00000516715 107 ntBASIC5.78□□□□□ -1.48
MRE11P49959 NRON-201ENST00000517270 370 ntBASIC5.78□□□□□ -1.48
MRE11P49959 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.78□□□□□ -1.48
MRE11P49959 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.78□□□□□ -1.48
MRE11P49959 NAP1L1P1-201ENST00000524793 1063 ntBASIC5.78□□□□□ -1.48
MRE11P49959 OR5AK3P-201ENST00000527486 1297 ntBASIC5.78□□□□□ -1.48
MRE11P49959 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
MRE11P49959 HIGD1AP17-201ENST00000554576 276 ntBASIC5.78□□□□□ -1.48
MRE11P49959 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.78□□□□□ -1.48
MRE11P49959 AP002360.4-201ENST00000606980 481 ntBASIC5.78□□□□□ -1.48
MRE11P49959 AC092794.1-201ENST00000612734 582 ntBASIC5.78□□□□□ -1.48
MRE11P49959 AC234782.5-201ENST00000617723 324 ntBASIC5.78□□□□□ -1.48
MRE11P49959 AP001005.3-201ENST00000622049 129 ntBASIC5.78□□□□□ -1.48
MRE11P49959 AL161637.1-201ENST00000622380 412 ntBASIC5.78□□□□□ -1.48
MRE11P49959 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.78□□□□□ -1.48
MRE11P49959 MIR4278-201ENST00000636094 69 ntBASIC5.78□□□□□ -1.48
MRE11P49959 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
MRE11P49959 AP000776.1-201ENST00000530032 1663 ntBASIC5.78□□□□□ -1.48
MRE11P49959 AL359922.3-201ENST00000624779 1670 ntBASIC5.78□□□□□ -1.48
MRE11P49959 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.78□□□□□ -1.48
MRE11P49959 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
MRE11P49959 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
MRE11P49959 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.78□□□□□ -1.48
MRE11P49959 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
MRE11P49959 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
MRE11P49959 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.77□□□□□ -1.49
MRE11P49959 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
MRE11P49959 RPS24P12-201ENST00000402084 394 ntBASIC5.77□□□□□ -1.49
MRE11P49959 GAPDHP42-201ENST00000406848 981 ntBASIC5.77□□□□□ -1.49
MRE11P49959 CEACAMP8-201ENST00000413902 580 ntBASIC5.77□□□□□ -1.49
MRE11P49959 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.77□□□□□ -1.49
MRE11P49959 AL049610.1-201ENST00000423374 372 ntBASIC5.77□□□□□ -1.49
MRE11P49959 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.77□□□□□ -1.49
MRE11P49959 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.77□□□□□ -1.49
MRE11P49959 RSL24D1P6-201ENST00000426934 401 ntBASIC5.77□□□□□ -1.49
MRE11P49959 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.77□□□□□ -1.49
MRE11P49959 AL031667.1-201ENST00000440222 725 ntBASIC5.77□□□□□ -1.49
MRE11P49959 AL929288.2-201ENST00000446368 407 ntBASIC5.77□□□□□ -1.49
MRE11P49959 FTH1P25-201ENST00000447665 469 ntBASIC5.77□□□□□ -1.49
MRE11P49959 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.77□□□□□ -1.49
MRE11P49959 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.77□□□□□ -1.49
MRE11P49959 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.77□□□□□ -1.49
MRE11P49959 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.77□□□□□ -1.49
MRE11P49959 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.77□□□□□ -1.49
MRE11P49959 RNU6-1308P-201ENST00000516817 103 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 138.1 ms