Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.37□□□□□ -1.87
SRP9P49458 YY1P1-201ENST00000427625 668 ntBASIC3.37□□□□□ -1.87
SRP9P49458 EIF2S2P3-201ENST00000428356 999 ntBASIC3.37□□□□□ -1.87
SRP9P49458 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.37□□□□□ -1.87
SRP9P49458 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.37□□□□□ -1.87
SRP9P49458 OR4C10P-201ENST00000434991 931 ntBASIC3.37□□□□□ -1.87
SRP9P49458 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC3.37□□□□□ -1.87
SRP9P49458 RPL21P89-201ENST00000444021 467 ntBASIC3.37□□□□□ -1.87
SRP9P49458 RPS29P31-201ENST00000446147 164 ntBASIC3.37□□□□□ -1.87
SRP9P49458 RPS11P1-201ENST00000451072 473 ntBASIC3.37□□□□□ -1.87
SRP9P49458 AC103987.1-201ENST00000473394 348 ntBASIC3.37□□□□□ -1.87
SRP9P49458 AP000893.1-201ENST00000474462 794 ntBASIC3.37□□□□□ -1.87
SRP9P49458 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SRP9P49458 RN7SL132P-201ENST00000478131 296 ntBASIC3.37□□□□□ -1.87
SRP9P49458 TPT1P3-201ENST00000492841 512 ntBASIC3.37□□□□□ -1.87
SRP9P49458 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.37□□□□□ -1.87
SRP9P49458 MTCO1P30-201ENST00000515244 580 ntBASIC3.37□□□□□ -1.87
SRP9P49458 RNA5SP179-201ENST00000517284 121 ntBASIC3.37□□□□□ -1.87
SRP9P49458 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.37□□□□□ -1.87
SRP9P49458 OR8R1P-201ENST00000543943 764 ntBASIC3.37□□□□□ -1.87
SRP9P49458 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.37□□□□□ -1.87
SRP9P49458 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.37□□□□□ -1.87
SRP9P49458 AC090877.1-201ENST00000561418 344 ntBASIC3.37□□□□□ -1.87
SRP9P49458 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.37□□□□□ -1.87
SRP9P49458 AC006270.2-201ENST00000578523 652 ntBASIC3.37□□□□□ -1.87
SRP9P49458 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.37□□□□□ -1.87
SRP9P49458 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.37□□□□□ -1.87
SRP9P49458 AC099778.2-201ENST00000610904 211 ntBASIC3.37□□□□□ -1.87
SRP9P49458 AL731566.2-201ENST00000618971 317 ntBASIC3.37□□□□□ -1.87
SRP9P49458 MIR6500-201ENST00000622700 86 ntBASIC3.37□□□□□ -1.87
SRP9P49458 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.37□□□□□ -1.87
SRP9P49458 AC017002.4-201ENST00000604721 1525 ntBASIC3.37□□□□□ -1.87
SRP9P49458 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
SRP9P49458 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.37□□□□□ -1.87
SRP9P49458 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.37□□□□□ -1.87
SRP9P49458 AC073073.2-201ENST00000609827 2578 ntBASIC3.37□□□□□ -1.87
SRP9P49458 AC138915.3-201ENST00000562908 1389 ntBASIC3.37□□□□□ -1.87
SRP9P49458 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SRP9P49458 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
SRP9P49458 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SRP9P49458 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
SRP9P49458 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SRP9P49458 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SRP9P49458 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SRP9P49458 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SRP9P49458 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
SRP9P49458 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
SRP9P49458 MIR184-201ENST00000384962 84 ntBASIC3.36□□□□□ -1.87
SRP9P49458 AC136624.1-201ENST00000400791 413 ntBASIC3.36□□□□□ -1.87
SRP9P49458 PPIAP31-201ENST00000405422 495 ntBASIC3.36□□□□□ -1.87
SRP9P49458 RPL31P52-201ENST00000407532 367 ntBASIC3.36□□□□□ -1.87
SRP9P49458 RNU2-37P-201ENST00000410695 177 ntBASIC3.36□□□□□ -1.87
SRP9P49458 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.36□□□□□ -1.87
SRP9P49458 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SRP9P49458 OR8F1P-201ENST00000425243 930 ntBASIC3.36□□□□□ -1.87
SRP9P49458 UBE2V2P1-201ENST00000434717 398 ntBASIC3.36□□□□□ -1.87
SRP9P49458 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.36□□□□□ -1.87
SRP9P49458 NUTF2P7-201ENST00000453086 375 ntBASIC3.36□□□□□ -1.87
SRP9P49458 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.36□□□□□ -1.87
SRP9P49458 AC004801.2-202ENST00000463559 283 ntBASIC3.36□□□□□ -1.87
SRP9P49458 AC010460.1-201ENST00000507087 466 ntBASIC3.36□□□□□ -1.87
SRP9P49458 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.36□□□□□ -1.87
SRP9P49458 AC093331.1-201ENST00000521474 169 ntBASIC3.36□□□□□ -1.87
SRP9P49458 OR4A12P-201ENST00000530847 918 ntBASIC3.36□□□□□ -1.87
SRP9P49458 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.36□□□□□ -1.87
SRP9P49458 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.36□□□□□ -1.87
SRP9P49458 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.36□□□□□ -1.87
SRP9P49458 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.36□□□□□ -1.87
SRP9P49458 CYP2C60P-201ENST00000566088 139 ntBASIC3.36□□□□□ -1.87
SRP9P49458 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.36□□□□□ -1.87
SRP9P49458 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.36□□□□□ -1.87
SRP9P49458 AC091167.4-201ENST00000605079 184 ntBASIC3.36□□□□□ -1.87
SRP9P49458 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
SRP9P49458 AC068724.3-201ENST00000625906 87 ntBASIC3.36□□□□□ -1.87
SRP9P49458 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.36□□□□□ -1.87
SRP9P49458 AC092326.2-201ENST00000624772 1561 ntBASIC3.36□□□□□ -1.87
SRP9P49458 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SRP9P49458 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.36□□□□□ -1.87
SRP9P49458 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SRP9P49458 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.36□□□□□ -1.87
SRP9P49458 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.35□□□□□ -1.87
SRP9P49458 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SRP9P49458 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SRP9P49458 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SRP9P49458 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SRP9P49458 RNA5SP399-201ENST00000364003 117 ntBASIC3.35□□□□□ -1.87
SRP9P49458 RNU4-7P-201ENST00000364758 141 ntBASIC3.35□□□□□ -1.87
SRP9P49458 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SRP9P49458 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SRP9P49458 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.35□□□□□ -1.87
SRP9P49458 Z97055.1-201ENST00000419730 712 ntBASIC3.35□□□□□ -1.87
SRP9P49458 NEK4P1-201ENST00000433383 879 ntBASIC3.35□□□□□ -1.87
SRP9P49458 HMGB3P30-201ENST00000457863 606 ntBASIC3.35□□□□□ -1.87
SRP9P49458 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.35□□□□□ -1.87
SRP9P49458 AC026784.1-201ENST00000507986 352 ntBASIC3.35□□□□□ -1.87
SRP9P49458 FTH1P21-201ENST00000512179 511 ntBASIC3.35□□□□□ -1.87
SRP9P49458 AC108064.1-201ENST00000513791 460 ntBASIC3.35□□□□□ -1.87
SRP9P49458 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.35□□□□□ -1.87
SRP9P49458 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.35□□□□□ -1.87
SRP9P49458 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms