Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 AC138907.10-201ENST00000623708 983 ntBASIC4.13□□□□□ -1.75
TNFRSF4P43489 AC020978.9-201ENST00000624380 1141 ntBASIC4.13□□□□□ -1.75
TNFRSF4P43489 AC106730.3-201ENST00000624568 641 ntBASIC4.13□□□□□ -1.75
TNFRSF4P43489 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.13□□□□□ -1.75
TNFRSF4P43489 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.13□□□□□ -1.75
TNFRSF4P43489 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
TNFRSF4P43489 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
TNFRSF4P43489 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.13□□□□□ -1.75
TNFRSF4P43489 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.13□□□□□ -1.75
TNFRSF4P43489 MFSD8-213ENST00000641134 1327 ntBASIC4.13□□□□□ -1.75
TNFRSF4P43489 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TNFRSF4P43489 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TNFRSF4P43489 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.13□□□□□ -1.75
TNFRSF4P43489 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TNFRSF4P43489 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
TNFRSF4P43489 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TNFRSF4P43489 AL049737.1-201ENST00000413920 1403 ntBASIC4.12□□□□□ -1.75
TNFRSF4P43489 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TNFRSF4P43489 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TNFRSF4P43489 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
TNFRSF4P43489 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TNFRSF4P43489 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
TNFRSF4P43489 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TNFRSF4P43489 AC007529.1-201ENST00000418574 2178 ntBASIC4.12□□□□□ -1.75
TNFRSF4P43489 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
TNFRSF4P43489 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
TNFRSF4P43489 FAM91A3P-201ENST00000456826 2544 ntBASIC4.12□□□□□ -1.75
TNFRSF4P43489 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TNFRSF4P43489 ENSAP3-201ENST00000312710 333 ntBASIC4.12□□□□□ -1.75
TNFRSF4P43489 AL590704.1-201ENST00000402856 794 ntBASIC4.12□□□□□ -1.75
TNFRSF4P43489 RNU2-6P-201ENST00000411404 190 ntBASIC4.12□□□□□ -1.75
TNFRSF4P43489 AC092745.2-202ENST00000411880 369 ntBASIC4.12□□□□□ -1.75
TNFRSF4P43489 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TNFRSF4P43489 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TNFRSF4P43489 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.12□□□□□ -1.75
TNFRSF4P43489 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.12□□□□□ -1.75
TNFRSF4P43489 AL451062.2-201ENST00000427515 271 ntBASIC4.12□□□□□ -1.75
TNFRSF4P43489 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TNFRSF4P43489 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.12□□□□□ -1.75
TNFRSF4P43489 MOB1AP2-201ENST00000446060 614 ntBASIC4.12□□□□□ -1.75
TNFRSF4P43489 AL133547.1-201ENST00000448546 220 ntBASIC4.12□□□□□ -1.75
TNFRSF4P43489 RPL23AP2-201ENST00000471227 466 ntBASIC4.12□□□□□ -1.75
TNFRSF4P43489 SETP6-201ENST00000479329 568 ntBASIC4.12□□□□□ -1.75
TNFRSF4P43489 RPS4XP15-201ENST00000489210 795 ntBASIC4.12□□□□□ -1.75
TNFRSF4P43489 AL139099.1-201ENST00000497398 403 ntBASIC4.12□□□□□ -1.75
TNFRSF4P43489 AC008565.1-201ENST00000509046 885 ntBASIC4.12□□□□□ -1.75
TNFRSF4P43489 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.12□□□□□ -1.75
TNFRSF4P43489 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.12□□□□□ -1.75
TNFRSF4P43489 PAICSP4-201ENST00000517543 1253 ntBASIC4.12□□□□□ -1.75
TNFRSF4P43489 AC010306.1-201ENST00000523223 1117 ntBASIC4.12□□□□□ -1.75
TNFRSF4P43489 AC083923.1-201ENST00000523708 376 ntBASIC4.12□□□□□ -1.75
TNFRSF4P43489 OR4R2P-201ENST00000530815 597 ntBASIC4.12□□□□□ -1.75
TNFRSF4P43489 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.12□□□□□ -1.75
TNFRSF4P43489 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.12□□□□□ -1.75
TNFRSF4P43489 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.12□□□□□ -1.75
TNFRSF4P43489 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.12□□□□□ -1.75
TNFRSF4P43489 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.12□□□□□ -1.75
TNFRSF4P43489 AC053481.3-201ENST00000577881 843 ntBASIC4.12□□□□□ -1.75
TNFRSF4P43489 AC012417.1-201ENST00000582307 1039 ntBASIC4.12□□□□□ -1.75
TNFRSF4P43489 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.12□□□□□ -1.75
TNFRSF4P43489 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.12□□□□□ -1.75
TNFRSF4P43489 NTAN1P1-201ENST00000603150 646 ntBASIC4.12□□□□□ -1.75
TNFRSF4P43489 AC005776.1-201ENST00000603164 290 ntBASIC4.12□□□□□ -1.75
TNFRSF4P43489 AC005014.3-201ENST00000605985 190 ntBASIC4.12□□□□□ -1.75
TNFRSF4P43489 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.12□□□□□ -1.75
TNFRSF4P43489 AC084824.5-201ENST00000612009 413 ntBASIC4.12□□□□□ -1.75
TNFRSF4P43489 AC039056.2-201ENST00000622261 511 ntBASIC4.12□□□□□ -1.75
TNFRSF4P43489 CR392039.5-201ENST00000623201 510 ntBASIC4.12□□□□□ -1.75
TNFRSF4P43489 AC138965.3-201ENST00000623875 498 ntBASIC4.12□□□□□ -1.75
TNFRSF4P43489 BMS1P21-201ENST00000634565 365 ntBASIC4.12□□□□□ -1.75
TNFRSF4P43489 AC132825.7-201ENST00000638744 335 ntBASIC4.12□□□□□ -1.75
TNFRSF4P43489 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
TNFRSF4P43489 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.12□□□□□ -1.75
TNFRSF4P43489 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TNFRSF4P43489 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TNFRSF4P43489 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.11□□□□□ -1.75
TNFRSF4P43489 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
TNFRSF4P43489 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.11□□□□□ -1.75
TNFRSF4P43489 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TNFRSF4P43489 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TNFRSF4P43489 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
TNFRSF4P43489 RNU6-543P-201ENST00000362576 108 ntBASIC4.11□□□□□ -1.75
TNFRSF4P43489 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
TNFRSF4P43489 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TNFRSF4P43489 AL359643.1-201ENST00000404109 423 ntBASIC4.11□□□□□ -1.75
TNFRSF4P43489 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.11□□□□□ -1.75
TNFRSF4P43489 MTND2P15-201ENST00000418575 892 ntBASIC4.11□□□□□ -1.75
TNFRSF4P43489 RPL30P3-201ENST00000424262 333 ntBASIC4.11□□□□□ -1.75
TNFRSF4P43489 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.11□□□□□ -1.75
TNFRSF4P43489 AL035246.1-201ENST00000433554 1255 ntBASIC4.11□□□□□ -1.75
TNFRSF4P43489 RAD23BP3-201ENST00000454157 1152 ntBASIC4.11□□□□□ -1.75
TNFRSF4P43489 OR9M1P-201ENST00000459641 921 ntBASIC4.11□□□□□ -1.75
TNFRSF4P43489 RPL7P15-201ENST00000461190 712 ntBASIC4.11□□□□□ -1.75
TNFRSF4P43489 CYCSP20-201ENST00000473154 315 ntBASIC4.11□□□□□ -1.75
TNFRSF4P43489 RPS3AP6-201ENST00000484430 795 ntBASIC4.11□□□□□ -1.75
TNFRSF4P43489 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.11□□□□□ -1.75
TNFRSF4P43489 FTH1P24-201ENST00000503502 462 ntBASIC4.11□□□□□ -1.75
TNFRSF4P43489 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.11□□□□□ -1.75
TNFRSF4P43489 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.11□□□□□ -1.75
TNFRSF4P43489 RN7SKP283-201ENST00000517197 270 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 159.1 ms