Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.6□□□□□ -1.67
HADHAP40939 AC106883.1-201ENST00000418805 562 ntBASIC4.6□□□□□ -1.67
HADHAP40939 AC008280.1-201ENST00000418851 412 ntBASIC4.6□□□□□ -1.67
HADHAP40939 AC008065.1-201ENST00000428525 348 ntBASIC4.6□□□□□ -1.67
HADHAP40939 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.6□□□□□ -1.67
HADHAP40939 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
HADHAP40939 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.6□□□□□ -1.67
HADHAP40939 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.6□□□□□ -1.67
HADHAP40939 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.6□□□□□ -1.67
HADHAP40939 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.6□□□□□ -1.67
HADHAP40939 AC008897.1-201ENST00000494006 347 ntBASIC4.6□□□□□ -1.67
HADHAP40939 MTND4LP2-201ENST00000502312 285 ntBASIC4.6□□□□□ -1.67
HADHAP40939 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HADHAP40939 AC090071.1-201ENST00000507713 644 ntBASIC4.6□□□□□ -1.67
HADHAP40939 HPRT1P1-201ENST00000509498 657 ntBASIC4.6□□□□□ -1.67
HADHAP40939 TPT1P8-201ENST00000510120 555 ntBASIC4.6□□□□□ -1.67
HADHAP40939 KRT19P6-201ENST00000510983 209 ntBASIC4.6□□□□□ -1.67
HADHAP40939 AC007016.1-201ENST00000512110 244 ntBASIC4.6□□□□□ -1.67
HADHAP40939 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.6□□□□□ -1.67
HADHAP40939 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.6□□□□□ -1.67
HADHAP40939 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.6□□□□□ -1.67
HADHAP40939 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.6□□□□□ -1.67
HADHAP40939 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
HADHAP40939 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.6□□□□□ -1.67
HADHAP40939 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.6□□□□□ -1.67
HADHAP40939 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.6□□□□□ -1.67
HADHAP40939 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.6□□□□□ -1.67
HADHAP40939 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.6□□□□□ -1.67
HADHAP40939 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HADHAP40939 AC008687.2-201ENST00000597865 520 ntBASIC4.6□□□□□ -1.67
HADHAP40939 AC091057.3-201ENST00000602684 733 ntBASIC4.6□□□□□ -1.67
HADHAP40939 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.6□□□□□ -1.67
HADHAP40939 AP000238.1-201ENST00000608759 426 ntBASIC4.6□□□□□ -1.67
HADHAP40939 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
HADHAP40939 AC091905.2-201ENST00000623143 306 ntBASIC4.6□□□□□ -1.67
HADHAP40939 MIR7641-1-201ENST00000627518 61 ntBASIC4.6□□□□□ -1.67
HADHAP40939 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.6□□□□□ -1.67
HADHAP40939 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
HADHAP40939 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HADHAP40939 KARSP3-201ENST00000571212 1504 ntBASIC4.6□□□□□ -1.67
HADHAP40939 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HADHAP40939 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HADHAP40939 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HADHAP40939 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HADHAP40939 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
HADHAP40939 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.59□□□□□ -1.67
HADHAP40939 RNU4-51P-201ENST00000364206 140 ntBASIC4.59□□□□□ -1.67
HADHAP40939 RNA5SP22-201ENST00000365393 109 ntBASIC4.59□□□□□ -1.67
HADHAP40939 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
HADHAP40939 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
HADHAP40939 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.59□□□□□ -1.67
HADHAP40939 RNU6-1293P-201ENST00000384077 107 ntBASIC4.59□□□□□ -1.67
HADHAP40939 RNU6-398P-201ENST00000384143 109 ntBASIC4.59□□□□□ -1.67
HADHAP40939 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HADHAP40939 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
HADHAP40939 RPS3AP23-201ENST00000401762 784 ntBASIC4.59□□□□□ -1.67
HADHAP40939 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HADHAP40939 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.59□□□□□ -1.67
HADHAP40939 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.59□□□□□ -1.67
HADHAP40939 ZNF33CP-201ENST00000432492 2030 ntBASIC4.59□□□□□ -1.67
HADHAP40939 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.59□□□□□ -1.67
HADHAP40939 MTCO1P53-201ENST00000441633 699 ntBASIC4.59□□□□□ -1.67
HADHAP40939 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.59□□□□□ -1.67
HADHAP40939 AL162591.2-201ENST00000449634 317 ntBASIC4.59□□□□□ -1.67
HADHAP40939 AC104164.3-201ENST00000467363 1258 ntBASIC4.59□□□□□ -1.67
HADHAP40939 AC069528.1-202ENST00000482888 637 ntBASIC4.59□□□□□ -1.67
HADHAP40939 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
HADHAP40939 RPL21P131-201ENST00000497298 483 ntBASIC4.59□□□□□ -1.67
HADHAP40939 MTND4P8-201ENST00000514997 1362 ntBASIC4.59□□□□□ -1.67
HADHAP40939 RNA5SP135-201ENST00000517019 125 ntBASIC4.59□□□□□ -1.67
HADHAP40939 AC091163.3-201ENST00000518269 1144 ntBASIC4.59□□□□□ -1.67
HADHAP40939 AC023632.1-201ENST00000518463 375 ntBASIC4.59□□□□□ -1.67
HADHAP40939 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.59□□□□□ -1.67
HADHAP40939 AP001207.1-201ENST00000524051 481 ntBASIC4.59□□□□□ -1.67
HADHAP40939 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.59□□□□□ -1.67
HADHAP40939 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HADHAP40939 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.59□□□□□ -1.67
HADHAP40939 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.59□□□□□ -1.67
HADHAP40939 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.59□□□□□ -1.67
HADHAP40939 AC124068.1-201ENST00000563131 678 ntBASIC4.59□□□□□ -1.67
HADHAP40939 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.59□□□□□ -1.67
HADHAP40939 RN7SL690P-201ENST00000582087 240 ntBASIC4.59□□□□□ -1.67
HADHAP40939 AP001180.3-201ENST00000582221 145 ntBASIC4.59□□□□□ -1.67
HADHAP40939 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.59□□□□□ -1.67
HADHAP40939 AC010928.1-201ENST00000592477 1447 ntBASIC4.59□□□□□ -1.67
HADHAP40939 BNIP3P40-201ENST00000596017 556 ntBASIC4.59□□□□□ -1.67
HADHAP40939 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.59□□□□□ -1.67
HADHAP40939 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.59□□□□□ -1.67
HADHAP40939 AC073091.2-201ENST00000603205 907 ntBASIC4.59□□□□□ -1.67
HADHAP40939 AL121652.1-201ENST00000608851 448 ntBASIC4.59□□□□□ -1.67
HADHAP40939 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.59□□□□□ -1.67
HADHAP40939 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
HADHAP40939 RNU6-156P-201ENST00000621869 107 ntBASIC4.59□□□□□ -1.67
HADHAP40939 AC010608.3-201ENST00000625048 527 ntBASIC4.59□□□□□ -1.67
HADHAP40939 AC087821.2-201ENST00000637086 450 ntBASIC4.59□□□□□ -1.67
HADHAP40939 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
HADHAP40939 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HADHAP40939 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
HADHAP40939 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
HADHAP40939 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms