Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RXRBP28702 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.73□□□□□ -1.33
RXRBP28702 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.73□□□□□ -1.33
RXRBP28702 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
RXRBP28702 SMG1P7-201ENST00000565246 2704 ntBASIC6.73□□□□□ -1.33
RXRBP28702 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RXRBP28702 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
RXRBP28702 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
RXRBP28702 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RXRBP28702 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
RXRBP28702 AC006210.2-201ENST00000367074 1545 ntBASIC6.72□□□□□ -1.33
RXRBP28702 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RXRBP28702 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.72□□□□□ -1.33
RXRBP28702 AC006026.1-201ENST00000444025 1803 ntBASIC6.72□□□□□ -1.33
RXRBP28702 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.72□□□□□ -1.33
RXRBP28702 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RXRBP28702 SNORD46.1-201ENST00000364139 104 ntBASIC6.72□□□□□ -1.33
RXRBP28702 RNU6-707P-201ENST00000364647 95 ntBASIC6.72□□□□□ -1.33
RXRBP28702 Y_RNA.582-201ENST00000391023 95 ntBASIC6.72□□□□□ -1.33
RXRBP28702 AC010385.1-201ENST00000412374 256 ntBASIC6.72□□□□□ -1.33
RXRBP28702 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC6.72□□□□□ -1.33
RXRBP28702 BTF3P9-201ENST00000418784 283 ntBASIC6.72□□□□□ -1.33
RXRBP28702 RPL21P32-201ENST00000419877 477 ntBASIC6.72□□□□□ -1.33
RXRBP28702 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC6.72□□□□□ -1.33
RXRBP28702 AC091390.3-201ENST00000426478 338 ntBASIC6.72□□□□□ -1.33
RXRBP28702 AL138787.1-202ENST00000437804 898 ntBASIC6.72□□□□□ -1.33
RXRBP28702 AC073614.1-201ENST00000438690 650 ntBASIC6.72□□□□□ -1.33
RXRBP28702 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC6.72□□□□□ -1.33
RXRBP28702 Z99127.3-201ENST00000448158 395 ntBASIC6.72□□□□□ -1.33
RXRBP28702 SLC25A18P1-201ENST00000449385 454 ntBASIC6.72□□□□□ -1.33
RXRBP28702 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC6.72□□□□□ -1.33
RXRBP28702 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC6.72□□□□□ -1.33
RXRBP28702 PPP1R11P1-201ENST00000486095 376 ntBASIC6.72□□□□□ -1.33
RXRBP28702 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC6.72□□□□□ -1.33
RXRBP28702 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC6.72□□□□□ -1.33
RXRBP28702 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC6.72□□□□□ -1.33
RXRBP28702 RN7SKP298-201ENST00000515950 94 ntBASIC6.72□□□□□ -1.33
RXRBP28702 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.72□□□□□ -1.33
RXRBP28702 OR5AK3P-201ENST00000527486 1297 ntBASIC6.72□□□□□ -1.33
RXRBP28702 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC6.72□□□□□ -1.33
RXRBP28702 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC6.72□□□□□ -1.33
RXRBP28702 AC017100.2-201ENST00000584628 355 ntBASIC6.72□□□□□ -1.33
RXRBP28702 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC6.72□□□□□ -1.33
RXRBP28702 RNA5SP196-201ENST00000625967 102 ntBASIC6.72□□□□□ -1.33
RXRBP28702 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.72□□□□□ -1.33
RXRBP28702 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
RXRBP28702 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
RXRBP28702 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
RXRBP28702 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
RXRBP28702 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RXRBP28702 AC005261.2-201ENST00000593427 4258 ntBASIC6.72□□□□□ -1.33
RXRBP28702 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RXRBP28702 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RXRBP28702 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RXRBP28702 CARF-203ENST00000414439 2099 ntTSL 2 BASIC6.72□□□□□ -1.33
RXRBP28702 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.72□□□□□ -1.33
RXRBP28702 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RXRBP28702 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
RXRBP28702 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
RXRBP28702 HSPD1P7-201ENST00000447985 1686 ntBASIC6.71□□□□□ -1.33
RXRBP28702 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
RXRBP28702 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
RXRBP28702 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.71□□□□□ -1.33
RXRBP28702 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.71□□□□□ -1.34
RXRBP28702 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
RXRBP28702 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RXRBP28702 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RXRBP28702 MT-TL1-201ENST00000386347 75 ntBASIC6.71□□□□□ -1.34
RXRBP28702 AL356057.2-201ENST00000403318 432 ntBASIC6.71□□□□□ -1.34
RXRBP28702 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC6.71□□□□□ -1.34
RXRBP28702 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RXRBP28702 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC6.71□□□□□ -1.34
RXRBP28702 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.71□□□□□ -1.34
RXRBP28702 AL354714.3-201ENST00000447284 493 ntBASIC6.71□□□□□ -1.34
RXRBP28702 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
RXRBP28702 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC6.71□□□□□ -1.34
RXRBP28702 RPL7L1P8-201ENST00000469911 741 ntBASIC6.71□□□□□ -1.34
RXRBP28702 AC135999.1-201ENST00000478962 479 ntBASIC6.71□□□□□ -1.34
RXRBP28702 TRBV5-2-201ENST00000489095 273 ntBASIC6.71□□□□□ -1.34
RXRBP28702 AL358832.1-201ENST00000497800 389 ntBASIC6.71□□□□□ -1.34
RXRBP28702 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC6.71□□□□□ -1.34
RXRBP28702 AC010350.1-201ENST00000504908 231 ntBASIC6.71□□□□□ -1.34
RXRBP28702 AC117522.3-201ENST00000507974 584 ntBASIC6.71□□□□□ -1.34
RXRBP28702 STMN1P2-201ENST00000508435 439 ntBASIC6.71□□□□□ -1.34
RXRBP28702 MTND3P22-201ENST00000510932 243 ntBASIC6.71□□□□□ -1.34
RXRBP28702 AC007016.1-201ENST00000512110 244 ntBASIC6.71□□□□□ -1.34
RXRBP28702 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC6.71□□□□□ -1.34
RXRBP28702 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC6.71□□□□□ -1.34
RXRBP28702 IGHV3-32-201ENST00000519182 355 ntBASIC6.71□□□□□ -1.34
RXRBP28702 OR5D2P-201ENST00000524390 911 ntBASIC6.71□□□□□ -1.34
RXRBP28702 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC6.71□□□□□ -1.34
RXRBP28702 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
RXRBP28702 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC6.71□□□□□ -1.34
RXRBP28702 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC6.71□□□□□ -1.34
RXRBP28702 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC6.71□□□□□ -1.34
RXRBP28702 AC011477.5-201ENST00000586571 259 ntBASIC6.71□□□□□ -1.34
RXRBP28702 AC005498.1-201ENST00000592125 465 ntBASIC6.71□□□□□ -1.34
RXRBP28702 AP000860.1-201ENST00000605250 559 ntBASIC6.71□□□□□ -1.34
RXRBP28702 AL133481.2-203ENST00000607558 139 ntBASIC6.71□□□□□ -1.34
RXRBP28702 AL445567.2-201ENST00000618935 498 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms