Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 RPL23AP25-201ENST00000430973 463 ntBASIC4.31□□□□□ -1.72
CDH3P22223 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.31□□□□□ -1.72
CDH3P22223 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.31□□□□□ -1.72
CDH3P22223 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.31□□□□□ -1.72
CDH3P22223 PHBP16-201ENST00000446318 950 ntBASIC4.31□□□□□ -1.72
CDH3P22223 RPL23AP43-201ENST00000446445 471 ntBASIC4.31□□□□□ -1.72
CDH3P22223 RPL21P71-201ENST00000465598 459 ntBASIC4.31□□□□□ -1.72
CDH3P22223 RPS23P7-201ENST00000466210 444 ntBASIC4.31□□□□□ -1.72
CDH3P22223 RPS4XP6-201ENST00000477670 797 ntBASIC4.31□□□□□ -1.72
CDH3P22223 AC146944.2-203ENST00000502493 354 ntBASIC4.31□□□□□ -1.72
CDH3P22223 AC139495.1-202ENST00000513164 354 ntBASIC4.31□□□□□ -1.72
CDH3P22223 AC008694.2-201ENST00000517591 306 ntBASIC4.31□□□□□ -1.72
CDH3P22223 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.31□□□□□ -1.72
CDH3P22223 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.31□□□□□ -1.72
CDH3P22223 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.31□□□□□ -1.72
CDH3P22223 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.31□□□□□ -1.72
CDH3P22223 AC027455.1-201ENST00000574104 594 ntBASIC4.31□□□□□ -1.72
CDH3P22223 NF1P5-201ENST00000588287 448 ntBASIC4.31□□□□□ -1.72
CDH3P22223 AC010680.4-201ENST00000605334 543 ntBASIC4.31□□□□□ -1.72
CDH3P22223 AL445423.1-201ENST00000609941 536 ntBASIC4.31□□□□□ -1.72
CDH3P22223 STMN1P1-201ENST00000617809 440 ntBASIC4.31□□□□□ -1.72
CDH3P22223 AC022079.2-201ENST00000619739 566 ntBASIC4.31□□□□□ -1.72
CDH3P22223 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.31□□□□□ -1.72
CDH3P22223 AC138907.10-201ENST00000623708 983 ntBASIC4.31□□□□□ -1.72
CDH3P22223 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CDH3P22223 AC004943.3-201ENST00000624116 600 ntBASIC4.31□□□□□ -1.72
CDH3P22223 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.31□□□□□ -1.72
CDH3P22223 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CDH3P22223 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDH3P22223 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDH3P22223 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.31□□□□□ -1.72
CDH3P22223 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDH3P22223 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDH3P22223 AC139769.1-204ENST00000472297 1931 ntBASIC4.31□□□□□ -1.72
CDH3P22223 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDH3P22223 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDH3P22223 AC138393.1-206ENST00000540997 1886 ntBASIC4.3□□□□□ -1.72
CDH3P22223 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDH3P22223 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CDH3P22223 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CDH3P22223 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CDH3P22223 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDH3P22223 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDH3P22223 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.3□□□□□ -1.72
CDH3P22223 RNU5E-10P-201ENST00000363506 118 ntBASIC4.3□□□□□ -1.72
CDH3P22223 SNORA72.3-201ENST00000365074 132 ntBASIC4.3□□□□□ -1.72
CDH3P22223 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CDH3P22223 AL603865.2-201ENST00000401679 213 ntBASIC4.3□□□□□ -1.72
CDH3P22223 CEACAMP1-201ENST00000434624 1035 ntBASIC4.3□□□□□ -1.72
CDH3P22223 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDH3P22223 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.3□□□□□ -1.72
CDH3P22223 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.3□□□□□ -1.72
CDH3P22223 CBX1P1-201ENST00000440184 427 ntBASIC4.3□□□□□ -1.72
CDH3P22223 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.3□□□□□ -1.72
CDH3P22223 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.3□□□□□ -1.72
CDH3P22223 RPL7P32-201ENST00000457119 744 ntBASIC4.3□□□□□ -1.72
CDH3P22223 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC4.3□□□□□ -1.72
CDH3P22223 AC026979.1-201ENST00000492525 396 ntBASIC4.3□□□□□ -1.72
CDH3P22223 RN7SL810P-201ENST00000493031 276 ntBASIC4.3□□□□□ -1.72
CDH3P22223 AC026414.1-201ENST00000504046 698 ntBASIC4.3□□□□□ -1.72
CDH3P22223 AC111193.1-201ENST00000504097 155 ntBASIC4.3□□□□□ -1.72
CDH3P22223 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.3□□□□□ -1.72
CDH3P22223 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.3□□□□□ -1.72
CDH3P22223 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDH3P22223 AC006499.6-201ENST00000511169 607 ntBASIC4.3□□□□□ -1.72
CDH3P22223 AC010376.1-201ENST00000522101 334 ntBASIC4.3□□□□□ -1.72
CDH3P22223 IFITM8P-201ENST00000522529 394 ntBASIC4.3□□□□□ -1.72
CDH3P22223 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.3□□□□□ -1.72
CDH3P22223 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.3□□□□□ -1.72
CDH3P22223 AC068831.4-201ENST00000556118 109 ntBASIC4.3□□□□□ -1.72
CDH3P22223 ATP5F1P7-201ENST00000567330 760 ntBASIC4.3□□□□□ -1.72
CDH3P22223 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.3□□□□□ -1.72
CDH3P22223 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC4.3□□□□□ -1.72
CDH3P22223 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.3□□□□□ -1.72
CDH3P22223 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.3□□□□□ -1.72
CDH3P22223 MIR4760-201ENST00000585040 80 ntBASIC4.3□□□□□ -1.72
CDH3P22223 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.3□□□□□ -1.72
CDH3P22223 BPIFA4P-203ENST00000603168 689 ntBASIC4.3□□□□□ -1.72
CDH3P22223 AL355816.1-201ENST00000607951 118 ntBASIC4.3□□□□□ -1.72
CDH3P22223 AC027449.1-201ENST00000608890 407 ntBASIC4.3□□□□□ -1.72
CDH3P22223 AC006338.2-201ENST00000616864 791 ntBASIC4.3□□□□□ -1.72
CDH3P22223 AC116563.2-201ENST00000624751 535 ntBASIC4.3□□□□□ -1.72
CDH3P22223 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.3□□□□□ -1.72
CDH3P22223 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CDH3P22223 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDH3P22223 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDH3P22223 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDH3P22223 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDH3P22223 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDH3P22223 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDH3P22223 AC095050.2-201ENST00000510748 1458 ntBASIC4.3□□□□□ -1.72
CDH3P22223 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.29□□□□□ -1.72
CDH3P22223 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.29□□□□□ -1.72
CDH3P22223 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
CDH3P22223 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CDH3P22223 SEC63P2-201ENST00000503863 1939 ntBASIC4.29□□□□□ -1.72
CDH3P22223 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.29□□□□□ -1.72
CDH3P22223 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDH3P22223 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDH3P22223 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms