Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC007390.1-201ENST00000415722 356 ntBASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 AC093162.1-201ENST00000419682 124 ntBASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 AC069157.1-201ENST00000421749 137 ntBASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 AL512649.1-201ENST00000428997 581 ntBASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 AC005229.2-201ENST00000456995 399 ntBASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 SNRPCP2-201ENST00000504370 475 ntBASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 PANCR-202ENST00000513690 448 ntTSL 2 BASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 RNU6-941P-201ENST00000516346 108 ntBASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 RNU6ATAC24P-201ENST00000516811 135 ntBASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 AC008127.2-201ENST00000549925 1075 ntBASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 AL049779.3-201ENST00000557141 606 ntBASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 AC010928.3-201ENST00000587712 541 ntBASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 AL009028.1-201ENST00000604895 802 ntBASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 AC008277.2-201ENST00000605196 797 ntBASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 AL451049.1-201ENST00000608672 497 ntBASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 AL121890.2-201ENST00000617644 465 ntBASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 AL022578.1-201ENST00000439330 1433 ntBASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
CSB-PGBD3P0DP91 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.23
CSB-PGBD3P0DP91 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC7.4□□□□□ -1.23
CSB-PGBD3P0DP91 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
CSB-PGBD3P0DP91 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC7.4□□□□□ -1.23
CSB-PGBD3P0DP91 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
CSB-PGBD3P0DP91 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
CSB-PGBD3P0DP91 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 HSPA8P18-201ENST00000439846 1928 ntBASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 AL034370.1-201ENST00000397254 1590 ntBASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 FRG1BP-201ENST00000278882 761 ntBASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 FRG1CP-201ENST00000358464 769 ntBASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 SNORA16A-201ENST00000384342 137 ntBASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 AC006466.1-201ENST00000438721 289 ntBASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 AL831737.1-201ENST00000441288 271 ntBASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 AC239367.2-201ENST00000447309 705 ntBASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 RPL26P28-201ENST00000451325 435 ntBASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 RPL21P71-201ENST00000465598 459 ntBASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 BX284632.1-201ENST00000478218 541 ntBASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 AC068522.1-201ENST00000482895 345 ntBASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 RNU6-327P-201ENST00000516270 127 ntBASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 RNU6-1045P-201ENST00000516321 107 ntBASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 AC115085.1-201ENST00000588924 229 ntBASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 AL365204.3-201ENST00000612448 685 ntBASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 AC005899.7-201ENST00000618199 588 ntBASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 AL359880.1-201ENST00000621879 266 ntBASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 AL596275.2-208ENST00000641192 594 ntBASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 CASC19-204ENST00000641001 2055 ntBASIC7.39□□□□□ -1.23
CSB-PGBD3P0DP91 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
CSB-PGBD3P0DP91 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CSB-PGBD3P0DP91 AC022031.1-201ENST00000585985 2593 ntBASIC7.38□□□□□ -1.23
CSB-PGBD3P0DP91 AC034229.2-201ENST00000566945 2508 ntBASIC7.38□□□□□ -1.23
CSB-PGBD3P0DP91 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CSB-PGBD3P0DP91 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
CSB-PGBD3P0DP91 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC7.38□□□□□ -1.23
CSB-PGBD3P0DP91 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC7.38□□□□□ -1.23
CSB-PGBD3P0DP91 SNORA56-201ENST00000383966 129 ntBASIC7.38□□□□□ -1.23
CSB-PGBD3P0DP91 RNU6-723P-201ENST00000383973 107 ntBASIC7.38□□□□□ -1.23
CSB-PGBD3P0DP91 RNU1-149P-201ENST00000390870 161 ntBASIC7.38□□□□□ -1.23
CSB-PGBD3P0DP91 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CSB-PGBD3P0DP91 AL360271.1-201ENST00000395679 510 ntBASIC7.38□□□□□ -1.23
CSB-PGBD3P0DP91 AL109941.1-201ENST00000401925 229 ntBASIC7.38□□□□□ -1.23
CSB-PGBD3P0DP91 AL450338.1-201ENST00000407987 512 ntBASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms