Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 HMGB1P26-201ENST00000452520 628 ntBASIC3.44□□□□□ -1.86
HLA-DPB1P04440 OR52A4P-202ENST00000481634 799 ntBASIC3.44□□□□□ -1.86
HLA-DPB1P04440 RNA5SP315-201ENST00000516340 116 ntBASIC3.44□□□□□ -1.86
HLA-DPB1P04440 RNA5SP312-201ENST00000517068 116 ntBASIC3.44□□□□□ -1.86
HLA-DPB1P04440 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.44□□□□□ -1.86
HLA-DPB1P04440 IGKV2D-10-201ENST00000520194 281 ntBASIC3.44□□□□□ -1.86
HLA-DPB1P04440 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.44□□□□□ -1.86
HLA-DPB1P04440 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DPB1P04440 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.44□□□□□ -1.86
HLA-DPB1P04440 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.44□□□□□ -1.86
HLA-DPB1P04440 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.44□□□□□ -1.86
HLA-DPB1P04440 RNU4-89P-201ENST00000607443 133 ntBASIC3.44□□□□□ -1.86
HLA-DPB1P04440 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.44□□□□□ -1.86
HLA-DPB1P04440 MIR6868-201ENST00000611215 58 ntBASIC3.44□□□□□ -1.86
HLA-DPB1P04440 AC011472.4-201ENST00000615848 491 ntBASIC3.44□□□□□ -1.86
HLA-DPB1P04440 AC007342.8-201ENST00000623278 678 ntBASIC3.44□□□□□ -1.86
HLA-DPB1P04440 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3.44□□□□□ -1.86
HLA-DPB1P04440 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DPB1P04440 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.44□□□□□ -1.86
HLA-DPB1P04440 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DPB1P04440 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.44□□□□□ -1.86
HLA-DPB1P04440 PWAR6-201ENST00000552334 4618 ntBASIC3.43□□□□□ -1.86
HLA-DPB1P04440 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
HLA-DPB1P04440 AC009951.1-201ENST00000623674 2614 ntBASIC3.43□□□□□ -1.86
HLA-DPB1P04440 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.43□□□□□ -1.86
HLA-DPB1P04440 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DPB1P04440 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.43□□□□□ -1.86
HLA-DPB1P04440 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
HLA-DPB1P04440 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DPB1P04440 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DPB1P04440 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
HLA-DPB1P04440 SNORA70.2-201ENST00000364506 135 ntBASIC3.43□□□□□ -1.86
HLA-DPB1P04440 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.43□□□□□ -1.86
HLA-DPB1P04440 RNU6-185P-201ENST00000384421 107 ntBASIC3.43□□□□□ -1.86
HLA-DPB1P04440 RPL21P65-201ENST00000406094 466 ntBASIC3.43□□□□□ -1.86
HLA-DPB1P04440 RNA5SP498-201ENST00000411342 120 ntBASIC3.43□□□□□ -1.86
HLA-DPB1P04440 RAB28P1-201ENST00000411517 641 ntBASIC3.43□□□□□ -1.86
HLA-DPB1P04440 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.43□□□□□ -1.86
HLA-DPB1P04440 MTND4LP14-201ENST00000429447 288 ntBASIC3.43□□□□□ -1.86
HLA-DPB1P04440 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DPB1P04440 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.43□□□□□ -1.86
HLA-DPB1P04440 TBCAP1-201ENST00000436520 327 ntBASIC3.43□□□□□ -1.86
HLA-DPB1P04440 AL691517.1-201ENST00000440833 1235 ntBASIC3.43□□□□□ -1.86
HLA-DPB1P04440 RANP8-201ENST00000444720 713 ntBASIC3.43□□□□□ -1.86
HLA-DPB1P04440 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.43□□□□□ -1.86
HLA-DPB1P04440 RN7SL860P-201ENST00000473738 223 ntBASIC3.43□□□□□ -1.86
HLA-DPB1P04440 NIPA2P2-201ENST00000496376 1083 ntBASIC3.43□□□□□ -1.86
HLA-DPB1P04440 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.43□□□□□ -1.86
HLA-DPB1P04440 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.43□□□□□ -1.86
HLA-DPB1P04440 AC025459.1-201ENST00000504072 156 ntBASIC3.43□□□□□ -1.86
HLA-DPB1P04440 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.43□□□□□ -1.86
HLA-DPB1P04440 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.43□□□□□ -1.86
HLA-DPB1P04440 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.43□□□□□ -1.86
HLA-DPB1P04440 AC018797.3-201ENST00000513388 1241 ntBASIC3.43□□□□□ -1.86
HLA-DPB1P04440 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.43□□□□□ -1.86
HLA-DPB1P04440 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.43□□□□□ -1.86
HLA-DPB1P04440 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.43□□□□□ -1.86
HLA-DPB1P04440 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.43□□□□□ -1.86
HLA-DPB1P04440 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.43□□□□□ -1.86
HLA-DPB1P04440 AC091515.1-201ENST00000548110 679 ntBASIC3.43□□□□□ -1.86
HLA-DPB1P04440 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.43□□□□□ -1.86
HLA-DPB1P04440 AC091516.1-201ENST00000549191 703 ntBASIC3.43□□□□□ -1.86
HLA-DPB1P04440 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.43□□□□□ -1.86
HLA-DPB1P04440 CYP2C60P-201ENST00000566088 139 ntBASIC3.43□□□□□ -1.86
HLA-DPB1P04440 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.43□□□□□ -1.86
HLA-DPB1P04440 MIR4644-201ENST00000579929 84 ntBASIC3.43□□□□□ -1.86
HLA-DPB1P04440 AC090312.1-201ENST00000580637 348 ntBASIC3.43□□□□□ -1.86
HLA-DPB1P04440 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.43□□□□□ -1.86
HLA-DPB1P04440 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.43□□□□□ -1.86
HLA-DPB1P04440 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.43□□□□□ -1.86
HLA-DPB1P04440 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.43□□□□□ -1.86
HLA-DPB1P04440 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DPB1P04440 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.43□□□□□ -1.86
HLA-DPB1P04440 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.43□□□□□ -1.86
HLA-DPB1P04440 MIR492-201ENST00000638676 116 ntBASIC3.43□□□□□ -1.86
HLA-DPB1P04440 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.43□□□□□ -1.86
HLA-DPB1P04440 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DPB1P04440 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.43□□□□□ -1.86
HLA-DPB1P04440 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DPB1P04440 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DPB1P04440 AL021368.2-201ENST00000606125 5352 ntBASIC3.43□□□□□ -1.86
HLA-DPB1P04440 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.42□□□□□ -1.86
HLA-DPB1P04440 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DPB1P04440 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DPB1P04440 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.42□□□□□ -1.86
HLA-DPB1P04440 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DPB1P04440 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.42□□□□□ -1.86
HLA-DPB1P04440 RNA5SP399-201ENST00000364003 117 ntBASIC3.42□□□□□ -1.86
HLA-DPB1P04440 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DPB1P04440 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
HLA-DPB1P04440 SNORA57.3-201ENST00000411095 141 ntBASIC3.42□□□□□ -1.86
HLA-DPB1P04440 RNU4-74P-201ENST00000411280 161 ntBASIC3.42□□□□□ -1.86
HLA-DPB1P04440 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.42□□□□□ -1.86
HLA-DPB1P04440 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.42□□□□□ -1.86
HLA-DPB1P04440 AC114814.2-201ENST00000419195 485 ntBASIC3.42□□□□□ -1.86
HLA-DPB1P04440 AL691449.1-201ENST00000426570 421 ntBASIC3.42□□□□□ -1.86
HLA-DPB1P04440 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.42□□□□□ -1.86
HLA-DPB1P04440 AL160175.1-201ENST00000428124 247 ntBASIC3.42□□□□□ -1.86
HLA-DPB1P04440 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.42□□□□□ -1.86
HLA-DPB1P04440 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms