Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.96□□□□□ -1.78
APOEP02649 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.96□□□□□ -1.78
APOEP02649 AC008802.1-201ENST00000519121 791 ntBASIC3.96□□□□□ -1.78
APOEP02649 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
APOEP02649 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.96□□□□□ -1.78
APOEP02649 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.96□□□□□ -1.78
APOEP02649 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
APOEP02649 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.96□□□□□ -1.78
APOEP02649 AC103710.3-201ENST00000608157 948 ntBASIC3.96□□□□□ -1.78
APOEP02649 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.96□□□□□ -1.78
APOEP02649 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.96□□□□□ -1.78
APOEP02649 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.96□□□□□ -1.78
APOEP02649 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
APOEP02649 ASNSP1-204ENST00000641977 1664 ntBASIC3.96□□□□□ -1.78
APOEP02649 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.96□□□□□ -1.78
APOEP02649 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
APOEP02649 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
APOEP02649 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.95□□□□□ -1.78
APOEP02649 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
APOEP02649 RNU6-146P-201ENST00000384602 108 ntBASIC3.95□□□□□ -1.78
APOEP02649 HLFP1-201ENST00000402375 499 ntBASIC3.95□□□□□ -1.78
APOEP02649 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
APOEP02649 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.95□□□□□ -1.78
APOEP02649 AL139247.1-201ENST00000422768 325 ntBASIC3.95□□□□□ -1.78
APOEP02649 RPL7P31-201ENST00000450192 724 ntBASIC3.95□□□□□ -1.78
APOEP02649 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
APOEP02649 AC093853.1-201ENST00000515689 483 ntBASIC3.95□□□□□ -1.78
APOEP02649 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.95□□□□□ -1.78
APOEP02649 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.95□□□□□ -1.78
APOEP02649 NPM1P35-201ENST00000533043 868 ntBASIC3.95□□□□□ -1.78
APOEP02649 AC090877.1-201ENST00000561418 344 ntBASIC3.95□□□□□ -1.78
APOEP02649 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
APOEP02649 AP005901.4-201ENST00000577336 569 ntBASIC3.95□□□□□ -1.78
APOEP02649 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.95□□□□□ -1.78
APOEP02649 AC083899.3-201ENST00000603413 594 ntBASIC3.95□□□□□ -1.78
APOEP02649 AC090953.1-201ENST00000604305 1092 ntBASIC3.95□□□□□ -1.78
APOEP02649 AL109618.2-201ENST00000605527 211 ntBASIC3.95□□□□□ -1.78
APOEP02649 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC3.95□□□□□ -1.78
APOEP02649 AP003400.2-201ENST00000624036 666 ntBASIC3.95□□□□□ -1.78
APOEP02649 AC020978.9-201ENST00000624380 1141 ntBASIC3.95□□□□□ -1.78
APOEP02649 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.95□□□□□ -1.78
APOEP02649 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.95□□□□□ -1.78
APOEP02649 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
APOEP02649 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
APOEP02649 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
APOEP02649 AC092079.1-201ENST00000558620 1985 ntBASIC3.94□□□□□ -1.78
APOEP02649 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
APOEP02649 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.94□□□□□ -1.78
APOEP02649 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.94□□□□□ -1.78
APOEP02649 ATP5F1P4-201ENST00000397288 746 ntBASIC3.94□□□□□ -1.78
APOEP02649 RNU6ATAC-201ENST00000408749 126 ntBASIC3.94□□□□□ -1.78
APOEP02649 AC009237.5-201ENST00000414271 501 ntBASIC3.94□□□□□ -1.78
APOEP02649 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
APOEP02649 RPL36AP36-201ENST00000418616 301 ntBASIC3.94□□□□□ -1.78
APOEP02649 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
APOEP02649 PTP4A1P5-201ENST00000420305 455 ntBASIC3.94□□□□□ -1.78
APOEP02649 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.94□□□□□ -1.78
APOEP02649 OR5AW1P-201ENST00000426334 1006 ntBASIC3.94□□□□□ -1.78
APOEP02649 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.94□□□□□ -1.78
APOEP02649 AC069277.2-201ENST00000454211 432 ntBASIC3.94□□□□□ -1.78
APOEP02649 HMGN2P7-201ENST00000456186 273 ntBASIC3.94□□□□□ -1.78
APOEP02649 AC108941.1-201ENST00000502853 530 ntBASIC3.94□□□□□ -1.78
APOEP02649 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.94□□□□□ -1.78
APOEP02649 SCARNA14-201ENST00000516903 136 ntBASIC3.94□□□□□ -1.78
APOEP02649 RNU1-45P-201ENST00000517191 141 ntBASIC3.94□□□□□ -1.78
APOEP02649 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.94□□□□□ -1.78
APOEP02649 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.94□□□□□ -1.78
APOEP02649 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.94□□□□□ -1.78
APOEP02649 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.94□□□□□ -1.78
APOEP02649 AL133457.1-201ENST00000564251 987 ntBASIC3.94□□□□□ -1.78
APOEP02649 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
APOEP02649 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
APOEP02649 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
APOEP02649 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
APOEP02649 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.94□□□□□ -1.78
APOEP02649 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
APOEP02649 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
APOEP02649 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
APOEP02649 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
APOEP02649 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
APOEP02649 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
APOEP02649 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.93□□□□□ -1.78
APOEP02649 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
APOEP02649 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.93□□□□□ -1.78
APOEP02649 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
APOEP02649 RNU6-328P-201ENST00000390887 106 ntBASIC3.93□□□□□ -1.78
APOEP02649 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
APOEP02649 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.93□□□□□ -1.78
APOEP02649 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.93□□□□□ -1.78
APOEP02649 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.93□□□□□ -1.78
APOEP02649 AC007389.2-201ENST00000434630 306 ntBASIC3.93□□□□□ -1.78
APOEP02649 AC122718.1-201ENST00000439448 744 ntBASIC3.93□□□□□ -1.78
APOEP02649 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.93□□□□□ -1.78
APOEP02649 AC009263.1-201ENST00000441193 1239 ntBASIC3.93□□□□□ -1.78
APOEP02649 RRM2P4-201ENST00000441721 562 ntBASIC3.93□□□□□ -1.78
APOEP02649 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
APOEP02649 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
APOEP02649 AC098824.1-201ENST00000453565 980 ntBASIC3.93□□□□□ -1.78
APOEP02649 CEACAMP4-201ENST00000457676 421 ntBASIC3.93□□□□□ -1.78
APOEP02649 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms