Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.34□□□□□ -1.87
SNRNP200O75643 AC109925.1-201ENST00000478069 331 ntBASIC3.34□□□□□ -1.87
SNRNP200O75643 RPS6P4-201ENST00000494693 758 ntBASIC3.34□□□□□ -1.87
SNRNP200O75643 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.34□□□□□ -1.87
SNRNP200O75643 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SNRNP200O75643 HMGB3P26-201ENST00000560051 582 ntBASIC3.34□□□□□ -1.87
SNRNP200O75643 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.34□□□□□ -1.87
SNRNP200O75643 AL163642.2-201ENST00000604722 1019 ntBASIC3.34□□□□□ -1.87
SNRNP200O75643 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.34□□□□□ -1.87
SNRNP200O75643 AC107021.2-201ENST00000567714 2095 ntBASIC3.34□□□□□ -1.87
SNRNP200O75643 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
SNRNP200O75643 NCAPGP1-201ENST00000505112 1814 ntBASIC3.34□□□□□ -1.88
SNRNP200O75643 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SNRNP200O75643 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.34□□□□□ -1.88
SNRNP200O75643 AL136116.1-201ENST00000403591 381 ntBASIC3.34□□□□□ -1.88
SNRNP200O75643 AL050321.1-201ENST00000432363 400 ntBASIC3.34□□□□□ -1.88
SNRNP200O75643 AC073063.1-201ENST00000434352 607 ntBASIC3.34□□□□□ -1.88
SNRNP200O75643 RPS15AP29-201ENST00000445539 400 ntBASIC3.34□□□□□ -1.88
SNRNP200O75643 NPM1P39-201ENST00000449818 867 ntBASIC3.34□□□□□ -1.88
SNRNP200O75643 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC3.34□□□□□ -1.88
SNRNP200O75643 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.34□□□□□ -1.88
SNRNP200O75643 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.34□□□□□ -1.88
SNRNP200O75643 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.34□□□□□ -1.88
SNRNP200O75643 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.34□□□□□ -1.88
SNRNP200O75643 AC017100.2-201ENST00000584628 355 ntBASIC3.34□□□□□ -1.88
SNRNP200O75643 AC006116.10-201ENST00000591836 581 ntBASIC3.34□□□□□ -1.88
SNRNP200O75643 AC007342.8-201ENST00000623278 678 ntBASIC3.34□□□□□ -1.88
SNRNP200O75643 AC067931.1-201ENST00000624190 671 ntBASIC3.34□□□□□ -1.88
SNRNP200O75643 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
SNRNP200O75643 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SNRNP200O75643 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SNRNP200O75643 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SNRNP200O75643 AC083899.2-201ENST00000423285 1376 ntBASIC3.33□□□□□ -1.88
SNRNP200O75643 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
SNRNP200O75643 AL627171.1-201ENST00000618845 1308 ntBASIC3.33□□□□□ -1.88
SNRNP200O75643 OR10J6P-201ENST00000289731 930 ntBASIC3.33□□□□□ -1.88
SNRNP200O75643 MIR137-201ENST00000385223 102 ntBASIC3.33□□□□□ -1.88
SNRNP200O75643 AL121834.1-202ENST00000404494 277 ntBASIC3.33□□□□□ -1.88
SNRNP200O75643 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.33□□□□□ -1.88
SNRNP200O75643 RPL21P110-201ENST00000433345 446 ntBASIC3.33□□□□□ -1.88
SNRNP200O75643 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.33□□□□□ -1.88
SNRNP200O75643 MTND2P25-201ENST00000449028 610 ntBASIC3.33□□□□□ -1.88
SNRNP200O75643 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.33□□□□□ -1.88
SNRNP200O75643 AC004069.2-201ENST00000505438 1114 ntBASIC3.33□□□□□ -1.88
SNRNP200O75643 AC005798.1-201ENST00000513715 387 ntBASIC3.33□□□□□ -1.88
SNRNP200O75643 AC010342.1-201ENST00000514047 877 ntBASIC3.33□□□□□ -1.88
SNRNP200O75643 RNU6-964P-201ENST00000516524 69 ntBASIC3.33□□□□□ -1.88
SNRNP200O75643 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.33□□□□□ -1.88
SNRNP200O75643 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.33□□□□□ -1.88
SNRNP200O75643 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.33□□□□□ -1.88
SNRNP200O75643 AP003355.3-201ENST00000623465 114 ntBASIC3.33□□□□□ -1.88
SNRNP200O75643 AL645937.1-201ENST00000641739 1652 ntBASIC3.33□□□□□ -1.88
SNRNP200O75643 DDX6P1-205ENST00000441966 1436 ntBASIC3.33□□□□□ -1.88
SNRNP200O75643 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.33□□□□□ -1.88
SNRNP200O75643 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.33□□□□□ -1.88
SNRNP200O75643 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.33□□□□□ -1.88
SNRNP200O75643 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.33□□□□□ -1.88
SNRNP200O75643 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SNRNP200O75643 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SNRNP200O75643 HSPD1P16-201ENST00000402302 394 ntBASIC3.32□□□□□ -1.88
SNRNP200O75643 AL391417.1-201ENST00000404100 426 ntBASIC3.32□□□□□ -1.88
SNRNP200O75643 RSL24D1P1-201ENST00000404972 493 ntBASIC3.32□□□□□ -1.88
SNRNP200O75643 AL512430.2-201ENST00000406786 339 ntBASIC3.32□□□□□ -1.88
SNRNP200O75643 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.32□□□□□ -1.88
SNRNP200O75643 AC005229.2-201ENST00000456995 399 ntBASIC3.32□□□□□ -1.88
SNRNP200O75643 U3.44-201ENST00000458938 192 ntBASIC3.32□□□□□ -1.88
SNRNP200O75643 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.32□□□□□ -1.88
SNRNP200O75643 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.32□□□□□ -1.88
SNRNP200O75643 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.32□□□□□ -1.88
SNRNP200O75643 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.32□□□□□ -1.88
SNRNP200O75643 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.32□□□□□ -1.88
SNRNP200O75643 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.32□□□□□ -1.88
SNRNP200O75643 AC087468.1-201ENST00000604365 630 ntBASIC3.32□□□□□ -1.88
SNRNP200O75643 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.32□□□□□ -1.88
SNRNP200O75643 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SNRNP200O75643 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
SNRNP200O75643 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
SNRNP200O75643 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SNRNP200O75643 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SNRNP200O75643 AL356274.2-201ENST00000624379 3752 ntBASIC3.32□□□□□ -1.88
SNRNP200O75643 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SNRNP200O75643 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SNRNP200O75643 RNU1-33P-201ENST00000364249 162 ntBASIC3.32□□□□□ -1.88
SNRNP200O75643 HMGN2P8-201ENST00000391458 268 ntBASIC3.32□□□□□ -1.88
SNRNP200O75643 Z99755.1-201ENST00000414048 380 ntBASIC3.32□□□□□ -1.88
SNRNP200O75643 AL356968.1-201ENST00000416622 474 ntBASIC3.32□□□□□ -1.88
SNRNP200O75643 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.32□□□□□ -1.88
SNRNP200O75643 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.32□□□□□ -1.88
SNRNP200O75643 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.32□□□□□ -1.88
SNRNP200O75643 AL591503.2-201ENST00000442314 1005 ntBASIC3.32□□□□□ -1.88
SNRNP200O75643 ANP32BP2-201ENST00000454525 545 ntBASIC3.32□□□□□ -1.88
SNRNP200O75643 AC026784.1-201ENST00000507986 352 ntBASIC3.32□□□□□ -1.88
SNRNP200O75643 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.32□□□□□ -1.88
SNRNP200O75643 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.32□□□□□ -1.88
SNRNP200O75643 RNU1-143P-201ENST00000516296 146 ntBASIC3.32□□□□□ -1.88
SNRNP200O75643 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.32□□□□□ -1.88
SNRNP200O75643 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.32□□□□□ -1.88
SNRNP200O75643 U1.23-201ENST00000610293 146 ntBASIC3.32□□□□□ -1.88
SNRNP200O75643 RNU1-68P-201ENST00000615382 146 ntBASIC3.32□□□□□ -1.88
SNRNP200O75643 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms