Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC011225.1-201ENST00000457751 369 ntBASIC4.97□□□□□ -1.61
PHGDHO43175 snoU13.7-201ENST00000459220 104 ntBASIC4.97□□□□□ -1.61
PHGDHO43175 RPS17P2-201ENST00000461663 408 ntBASIC4.97□□□□□ -1.61
PHGDHO43175 AC087879.1-201ENST00000474343 374 ntBASIC4.97□□□□□ -1.61
PHGDHO43175 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PHGDHO43175 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PHGDHO43175 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.97□□□□□ -1.61
PHGDHO43175 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PHGDHO43175 DSTNP2-201ENST00000504533 515 ntBASIC4.97□□□□□ -1.61
PHGDHO43175 AC110792.2-201ENST00000510278 224 ntBASIC4.97□□□□□ -1.61
PHGDHO43175 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.97□□□□□ -1.61
PHGDHO43175 AC027308.1-201ENST00000517993 110 ntBASIC4.97□□□□□ -1.61
PHGDHO43175 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.97□□□□□ -1.61
PHGDHO43175 OR4A12P-201ENST00000530847 918 ntBASIC4.97□□□□□ -1.61
PHGDHO43175 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.97□□□□□ -1.61
PHGDHO43175 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
PHGDHO43175 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.97□□□□□ -1.61
PHGDHO43175 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.97□□□□□ -1.61
PHGDHO43175 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.97□□□□□ -1.61
PHGDHO43175 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.97□□□□□ -1.61
PHGDHO43175 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PHGDHO43175 AC083899.3-201ENST00000603413 594 ntBASIC4.97□□□□□ -1.61
PHGDHO43175 AC073114.1-201ENST00000612027 490 ntBASIC4.97□□□□□ -1.61
PHGDHO43175 AC022106.2-201ENST00000620114 757 ntBASIC4.97□□□□□ -1.61
PHGDHO43175 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.97□□□□□ -1.61
PHGDHO43175 AC015871.5-202ENST00000623252 701 ntBASIC4.97□□□□□ -1.61
PHGDHO43175 AC079228.1-201ENST00000624774 1049 ntBASIC4.97□□□□□ -1.61
PHGDHO43175 AL355480.1-201ENST00000629041 99 ntBASIC4.97□□□□□ -1.61
PHGDHO43175 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.97□□□□□ -1.61
PHGDHO43175 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PHGDHO43175 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PHGDHO43175 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
PHGDHO43175 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PHGDHO43175 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PHGDHO43175 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PHGDHO43175 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.97□□□□□ -1.61
PHGDHO43175 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PHGDHO43175 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PHGDHO43175 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.61
PHGDHO43175 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
PHGDHO43175 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PHGDHO43175 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.96□□□□□ -1.62
PHGDHO43175 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PHGDHO43175 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PHGDHO43175 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PHGDHO43175 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PHGDHO43175 AC011155.1-201ENST00000316512 456 ntBASIC4.96□□□□□ -1.62
PHGDHO43175 RNU6-500P-201ENST00000362349 107 ntBASIC4.96□□□□□ -1.62
PHGDHO43175 RN7SKP269-201ENST00000365545 319 ntBASIC4.96□□□□□ -1.62
PHGDHO43175 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PHGDHO43175 U3.25-201ENST00000391209 220 ntBASIC4.96□□□□□ -1.62
PHGDHO43175 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.96□□□□□ -1.62
PHGDHO43175 RPS3AP9-201ENST00000417027 792 ntBASIC4.96□□□□□ -1.62
PHGDHO43175 TMBIM7P-201ENST00000418074 855 ntBASIC4.96□□□□□ -1.62
PHGDHO43175 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.96□□□□□ -1.62
PHGDHO43175 AC093698.1-201ENST00000423843 571 ntBASIC4.96□□□□□ -1.62
PHGDHO43175 AC073335.1-201ENST00000427776 363 ntBASIC4.96□□□□□ -1.62
PHGDHO43175 THAP5P1-201ENST00000439089 262 ntBASIC4.96□□□□□ -1.62
PHGDHO43175 RPS29P9-201ENST00000440360 171 ntBASIC4.96□□□□□ -1.62
PHGDHO43175 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.96□□□□□ -1.62
PHGDHO43175 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.96□□□□□ -1.62
PHGDHO43175 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.96□□□□□ -1.62
PHGDHO43175 VN1R10P-201ENST00000447106 875 ntBASIC4.96□□□□□ -1.62
PHGDHO43175 TCEA1P1-201ENST00000449716 880 ntBASIC4.96□□□□□ -1.62
PHGDHO43175 PPIAP20-201ENST00000449839 135 ntBASIC4.96□□□□□ -1.62
PHGDHO43175 AL591473.1-201ENST00000464297 313 ntBASIC4.96□□□□□ -1.62
PHGDHO43175 RN7SL799P-201ENST00000475891 298 ntBASIC4.96□□□□□ -1.62
PHGDHO43175 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.96□□□□□ -1.62
PHGDHO43175 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.96□□□□□ -1.62
PHGDHO43175 AC005726.1-201ENST00000494679 427 ntBASIC4.96□□□□□ -1.62
PHGDHO43175 RN7SL101P-201ENST00000496350 279 ntBASIC4.96□□□□□ -1.62
PHGDHO43175 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.96□□□□□ -1.62
PHGDHO43175 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.96□□□□□ -1.62
PHGDHO43175 SNX5P1-201ENST00000505757 1041 ntBASIC4.96□□□□□ -1.62
PHGDHO43175 MTATP6P22-201ENST00000507369 598 ntBASIC4.96□□□□□ -1.62
PHGDHO43175 MTCYBP43-201ENST00000513621 740 ntBASIC4.96□□□□□ -1.62
PHGDHO43175 BX510359.5-201ENST00000515651 304 ntBASIC4.96□□□□□ -1.62
PHGDHO43175 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.96□□□□□ -1.62
PHGDHO43175 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.96□□□□□ -1.62
PHGDHO43175 AC239860.2-201ENST00000525886 270 ntBASIC4.96□□□□□ -1.62
PHGDHO43175 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.96□□□□□ -1.62
PHGDHO43175 LSM6P2-201ENST00000552208 177 ntBASIC4.96□□□□□ -1.62
PHGDHO43175 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.96□□□□□ -1.62
PHGDHO43175 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.96□□□□□ -1.62
PHGDHO43175 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.96□□□□□ -1.62
PHGDHO43175 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.96□□□□□ -1.62
PHGDHO43175 MTCYBP28-201ENST00000566728 1132 ntBASIC4.96□□□□□ -1.62
PHGDHO43175 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.96□□□□□ -1.62
PHGDHO43175 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.96□□□□□ -1.62
PHGDHO43175 AC011260.1-201ENST00000578420 472 ntBASIC4.96□□□□□ -1.62
PHGDHO43175 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.96□□□□□ -1.62
PHGDHO43175 AC146944.4-201ENST00000602697 718 ntBASIC4.96□□□□□ -1.62
PHGDHO43175 WISP1-OT1-201ENST00000602893 642 ntBASIC4.96□□□□□ -1.62
PHGDHO43175 AC243773.3-201ENST00000613270 256 ntBASIC4.96□□□□□ -1.62
PHGDHO43175 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.96□□□□□ -1.62
PHGDHO43175 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.96□□□□□ -1.62
PHGDHO43175 AC127502.3-201ENST00000636170 1206 ntBASIC4.96□□□□□ -1.62
PHGDHO43175 AL049767.1-202ENST00000637826 242 ntBASIC4.96□□□□□ -1.62
PHGDHO43175 AC099063.3-201ENST00000642066 185 ntBASIC4.96□□□□□ -1.62
PHGDHO43175 AC007529.1-201ENST00000418574 2178 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms