Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
FOXN3O00409 RNU6-1293P-201ENST00000384077 107 ntBASIC5.11□□□□□ -1.59
FOXN3O00409 CASP3-203ENST00000393588 677 ntTSL 4 BASIC5.11□□□□□ -1.59
FOXN3O00409 MIR1271-201ENST00000408537 86 ntBASIC5.11□□□□□ -1.59
FOXN3O00409 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC5.11□□□□□ -1.59
FOXN3O00409 AC114755.2-201ENST00000413520 361 ntBASIC5.11□□□□□ -1.59
FOXN3O00409 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.11□□□□□ -1.59
FOXN3O00409 MTND2P18-201ENST00000419962 1030 ntBASIC5.11□□□□□ -1.59
FOXN3O00409 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.11□□□□□ -1.59
FOXN3O00409 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.11□□□□□ -1.59
FOXN3O00409 USP9YP11-201ENST00000427537 717 ntBASIC5.11□□□□□ -1.59
FOXN3O00409 OR2B7P-201ENST00000429302 934 ntBASIC5.11□□□□□ -1.59
FOXN3O00409 FABP7P2-201ENST00000429946 379 ntBASIC5.11□□□□□ -1.59
FOXN3O00409 AL050321.1-201ENST00000432363 400 ntBASIC5.11□□□□□ -1.59
FOXN3O00409 MTCYBP34-201ENST00000439552 670 ntBASIC5.11□□□□□ -1.59
FOXN3O00409 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
FOXN3O00409 OR52J1P-201ENST00000450596 932 ntBASIC5.11□□□□□ -1.59
FOXN3O00409 AL162388.1-201ENST00000450912 352 ntBASIC5.11□□□□□ -1.59
FOXN3O00409 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.11□□□□□ -1.59
FOXN3O00409 AURKAPS2-201ENST00000454983 333 ntBASIC5.11□□□□□ -1.59
FOXN3O00409 AC004453.1-201ENST00000487895 408 ntBASIC5.11□□□□□ -1.59
FOXN3O00409 OR5M14P-201ENST00000506803 618 ntBASIC5.11□□□□□ -1.59
FOXN3O00409 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC5.11□□□□□ -1.59
FOXN3O00409 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.11□□□□□ -1.59
FOXN3O00409 MTCO1P30-201ENST00000515244 580 ntBASIC5.11□□□□□ -1.59
FOXN3O00409 PTK2-220ENST00000520151 573 ntTSL 4 BASIC5.11□□□□□ -1.59
FOXN3O00409 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.11□□□□□ -1.59
FOXN3O00409 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.11□□□□□ -1.59
FOXN3O00409 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.11□□□□□ -1.59
FOXN3O00409 AC084757.1-201ENST00000559987 490 ntBASIC5.11□□□□□ -1.59
FOXN3O00409 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.11□□□□□ -1.59
FOXN3O00409 AC005951.1-201ENST00000576706 485 ntBASIC5.11□□□□□ -1.59
FOXN3O00409 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.11□□□□□ -1.59
FOXN3O00409 AC011487.3-201ENST00000593607 453 ntBASIC5.11□□□□□ -1.59
FOXN3O00409 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC5.11□□□□□ -1.59
FOXN3O00409 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.11□□□□□ -1.59
FOXN3O00409 SDR42E1P1-201ENST00000611327 477 ntBASIC5.11□□□□□ -1.59
FOXN3O00409 AL139418.1-201ENST00000613613 177 ntBASIC5.11□□□□□ -1.59
FOXN3O00409 AC022106.2-201ENST00000620114 757 ntBASIC5.11□□□□□ -1.59
FOXN3O00409 RNU6-156P-201ENST00000621869 107 ntBASIC5.11□□□□□ -1.59
FOXN3O00409 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.11□□□□□ -1.59
FOXN3O00409 AC067852.7-201ENST00000623270 535 ntBASIC5.11□□□□□ -1.59
FOXN3O00409 AC107982.1-201ENST00000507171 1300 ntBASIC5.11□□□□□ -1.59
FOXN3O00409 NCLP2-201ENST00000416078 1462 ntBASIC5.11□□□□□ -1.59
FOXN3O00409 AC005539.1-201ENST00000443768 1479 ntBASIC5.11□□□□□ -1.59
FOXN3O00409 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.11□□□□□ -1.59
FOXN3O00409 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
FOXN3O00409 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.11□□□□□ -1.59
FOXN3O00409 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.11□□□□□ -1.59
FOXN3O00409 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
FOXN3O00409 XPOTP1-201ENST00000443317 2398 ntBASIC5.11□□□□□ -1.59
FOXN3O00409 OR14L1P-202ENST00000641545 3009 ntBASIC5.1□□□□□ -1.59
FOXN3O00409 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.1□□□□□ -1.59
FOXN3O00409 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
FOXN3O00409 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.1□□□□□ -1.59
FOXN3O00409 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
FOXN3O00409 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
FOXN3O00409 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
FOXN3O00409 SNORA51.8-201ENST00000384234 132 ntBASIC5.1□□□□□ -1.59
FOXN3O00409 AL356131.1-201ENST00000405826 414 ntBASIC5.1□□□□□ -1.59
FOXN3O00409 AC092634.6-201ENST00000418558 192 ntBASIC5.1□□□□□ -1.59
FOXN3O00409 AC009237.2-201ENST00000421358 284 ntBASIC5.1□□□□□ -1.59
FOXN3O00409 IPMKP1-201ENST00000425988 855 ntBASIC5.1□□□□□ -1.59
FOXN3O00409 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.1□□□□□ -1.59
FOXN3O00409 AL354941.1-201ENST00000438600 464 ntBASIC5.1□□□□□ -1.59
FOXN3O00409 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC5.1□□□□□ -1.59
FOXN3O00409 AL133217.1-201ENST00000450980 425 ntBASIC5.1□□□□□ -1.59
FOXN3O00409 AC112206.1-201ENST00000468416 477 ntBASIC5.1□□□□□ -1.59
FOXN3O00409 AC010683.1-201ENST00000473673 378 ntBASIC5.1□□□□□ -1.59
FOXN3O00409 AC113430.1-201ENST00000506872 718 ntBASIC5.1□□□□□ -1.59
FOXN3O00409 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.1□□□□□ -1.59
FOXN3O00409 AC091868.1-201ENST00000508746 304 ntBASIC5.1□□□□□ -1.59
FOXN3O00409 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.1□□□□□ -1.59
FOXN3O00409 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.1□□□□□ -1.59
FOXN3O00409 AC021006.3-201ENST00000530771 192 ntBASIC5.1□□□□□ -1.59
FOXN3O00409 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.1□□□□□ -1.59
FOXN3O00409 DYNLL1P4-201ENST00000549314 266 ntBASIC5.1□□□□□ -1.59
FOXN3O00409 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.1□□□□□ -1.59
FOXN3O00409 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC5.1□□□□□ -1.59
FOXN3O00409 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC5.1□□□□□ -1.59
FOXN3O00409 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.1□□□□□ -1.59
FOXN3O00409 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC5.1□□□□□ -1.59
FOXN3O00409 AC008088.1-201ENST00000580993 280 ntBASIC5.1□□□□□ -1.59
FOXN3O00409 VN1R82P-201ENST00000601481 356 ntBASIC5.1□□□□□ -1.59
FOXN3O00409 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.1□□□□□ -1.59
FOXN3O00409 AC133644.2-201ENST00000608142 540 ntBASIC5.1□□□□□ -1.59
FOXN3O00409 FAM27B-201ENST00000610601 213 ntBASIC5.1□□□□□ -1.59
FOXN3O00409 AC009318.3-201ENST00000616916 503 ntBASIC5.1□□□□□ -1.59
FOXN3O00409 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.1□□□□□ -1.59
FOXN3O00409 Z73965.1-201ENST00000623412 2297 ntBASIC5.1□□□□□ -1.59
FOXN3O00409 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
FOXN3O00409 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
FOXN3O00409 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.1□□□□□ -1.59
FOXN3O00409 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
FOXN3O00409 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.1□□□□□ -1.59
FOXN3O00409 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
FOXN3O00409 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
FOXN3O00409 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
FOXN3O00409 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
FOXN3O00409 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms