Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 MRPS5P3-201ENST00000515577 166 ntBASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 RN7SKP147-201ENST00000517154 244 ntBASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 IGLVIV-64-201ENST00000518581 301 ntBASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 AC104027.1-201ENST00000521887 300 ntBASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 AC013701.1-201ENST00000522657 465 ntBASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 AC105233.3-201ENST00000531125 744 ntBASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 HSPE1P20-201ENST00000538133 289 ntBASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 AC008147.3-201ENST00000548666 354 ntBASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 EDDM3DP-201ENST00000554692 434 ntBASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 MIR5684-201ENST00000585074 65 ntBASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 AC006116.7-201ENST00000590141 756 ntBASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 AP001160.4-201ENST00000596971 382 ntBASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 AL354760.1-201ENST00000608357 643 ntBASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 AC019131.2-201ENST00000609071 870 ntBASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 AC006023.2-201ENST00000609916 167 ntBASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 AC107871.2-201ENST00000612894 502 ntBASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 AC100827.5-201ENST00000615883 426 ntBASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 PDCD6IPP1-202ENST00000622242 1064 ntBASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 LRRC77P-213ENST00000637727 880 ntBASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 AC116096.1-201ENST00000566804 2314 ntBASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 THUMPD3P1-201ENST00000506556 1480 ntBASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 ELL2P4-201ENST00000446870 1376 ntBASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 AL590240.1-201ENST00000334118 313 ntBASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 RNU6ATAC7P-201ENST00000408111 127 ntBASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 RPL35AP24-201ENST00000413846 330 ntBASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 CRYBB2P1-203ENST00000415709 538 ntBASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 HMGB3P20-201ENST00000417997 600 ntBASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 RFESDP1-201ENST00000422350 461 ntBASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 USP9YP36-201ENST00000424581 829 ntBASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 YWHAZP2-201ENST00000440317 728 ntBASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 RPS4XP4-201ENST00000443195 763 ntBASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 HMGN1P36-201ENST00000446623 298 ntBASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 AC053481.1-201ENST00000467217 306 ntBASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 AC098818.1-201ENST00000478593 252 ntBASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 NCOR1P1-202ENST00000486162 291 ntBASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 RN7SL30P-201ENST00000488416 306 ntBASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 RNU2-27P-201ENST00000516185 142 ntBASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 OR4A2P-201ENST00000527276 913 ntBASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 AC105129.1-201ENST00000560250 297 ntBASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 BNIP3P5-201ENST00000562290 498 ntBASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 AC069061.3-201ENST00000582254 823 ntBASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 AC245128.3-201ENST00000594721 748 ntBASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 uc_338.9-201ENST00000617424 182 ntBASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 AC139769.3-201ENST00000618383 175 ntBASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 AC091905.4-201ENST00000623432 202 ntBASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 AC110801.1-201ENST00000623590 212 ntBASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 AP000676.4-201ENST00000624659 623 ntBASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 CCT5-215ENST00000625723 135 ntTSL 5 BASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 AC073055.1-201ENST00000456901 1621 ntBASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 AC116667.1-201ENST00000604855 2072 ntBASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC1.97□□□□□ -2.09
CHKB-CPT1BH3BT56 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 MIR298-201ENST00000401212 88 ntBASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 HIST1H2APS3-201ENST00000403259 134 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms