Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 CYP1D1P-201ENST00000416662 1433 ntBASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 RNU4-7P-201ENST00000364758 141 ntBASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 RNA5SP424-201ENST00000390988 115 ntBASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 ST13P16-201ENST00000401760 781 ntBASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 MIR1183-201ENST00000408856 89 ntBASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 RNU2-72P-201ENST00000411175 163 ntBASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 HMGB3P20-201ENST00000417997 600 ntBASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 TCEA1P2-201ENST00000420496 906 ntBASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 SEC63P1-201ENST00000425785 1258 ntBASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 RPL17P35-201ENST00000432217 549 ntBASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 ELOCP10-201ENST00000440624 327 ntBASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 XKRY2-201ENST00000442362 1093 ntBASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 AC108729.2-201ENST00000476543 840 ntBASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 FABP5P6-201ENST00000510588 409 ntBASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 SNORA26.10-201ENST00000516427 141 ntBASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 SNORA31.9-201ENST00000516429 84 ntBASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 MRPL49P2-201ENST00000521066 465 ntBASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 CKS1BP1-201ENST00000555221 240 ntBASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 HNRNPCP4-201ENST00000571636 900 ntBASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 AC090079.2-201ENST00000575289 768 ntBASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 AC023575.1-201ENST00000580510 358 ntBASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 MIR3939-201ENST00000582614 106 ntBASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 AC015726.1-201ENST00000602353 681 ntBASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 ELOCP34-201ENST00000604436 327 ntBASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 AL592436.1-201ENST00000605135 558 ntBASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 AC006338.2-201ENST00000616864 791 ntBASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 AL109620.1-201ENST00000618738 1197 ntBASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 AP001486.2-201ENST00000561652 5113 ntBASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 AL592437.2-201ENST00000421655 2434 ntBASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 AC008725.1-201ENST00000605123 2263 ntBASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 AC022893.2-201ENST00000564832 3296 ntBASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 AC009313.2-201ENST00000417893 1941 ntBASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 AL049555.1-201ENST00000562834 1933 ntBASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 SNORA70.2-201ENST00000364506 135 ntBASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 SOD2P1-201ENST00000396543 562 ntBASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 FABP12P1-201ENST00000401911 322 ntBASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 AL049693.1-201ENST00000402760 611 ntBASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 SNORA57.3-201ENST00000411095 141 ntBASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 AL445528.1-201ENST00000426330 420 ntBASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 AP002345.1-201ENST00000456493 928 ntBASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 PRELID3BP5-201ENST00000508612 460 ntBASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 OR8K2P-201ENST00000524645 927 ntBASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 AC109635.6-201ENST00000525487 1113 ntBASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 AC008011.1-201ENST00000545989 227 ntBASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 AC136624.4-201ENST00000573044 370 ntBASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 OR4H6P-202ENST00000603819 340 ntBASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 AL163642.2-201ENST00000604722 1019 ntBASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 AL590392.1-201ENST00000604960 446 ntBASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 AL034351.1-201ENST00000605288 668 ntBASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 AL450270.1-201ENST00000606160 391 ntBASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 AC116447.1-201ENST00000613153 453 ntBASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 AC016957.2-201ENST00000616998 848 ntBASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 TNPO1P3-201ENST00000436471 2662 ntBASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 AL133412.1-201ENST00000380194 2992 ntBASIC3.72□□□□□ -1.81
TRIM49D1C9J1S8 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 AC110792.3-201ENST00000595906 1614 ntBASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms