Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 OR2L1P-202ENST00000641567 1023 ntBASIC4.6□□□□□ -1.67
TCRBV7S3A2A0A539 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TCRBV7S3A2A0A539 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TCRBV7S3A2A0A539 Z99496.1-201ENST00000469424 1477 ntBASIC4.6□□□□□ -1.67
TCRBV7S3A2A0A539 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
TCRBV7S3A2A0A539 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
TCRBV7S3A2A0A539 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.6□□□□□ -1.67
TCRBV7S3A2A0A539 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
TCRBV7S3A2A0A539 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.6□□□□□ -1.67
TCRBV7S3A2A0A539 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TCRBV7S3A2A0A539 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
TCRBV7S3A2A0A539 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 CPHL1P-201ENST00000461341 3407 ntBASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 AL022322.2-201ENST00000624072 20397 ntBASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 ATP5F1P3-201ENST00000397213 657 ntBASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 SKINT1L-201ENST00000401057 817 ntBASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 RNU6-757P-201ENST00000410334 100 ntBASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 RNA5SP146-201ENST00000410743 123 ntBASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 RNU6-272P-201ENST00000411028 104 ntBASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 AL390023.1-201ENST00000428836 262 ntBASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 SGO1P2-201ENST00000429458 1589 ntBASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 RPEP2-201ENST00000432149 701 ntBASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 AC008072.1-201ENST00000434254 824 ntBASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 AL627308.1-201ENST00000435693 821 ntBASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 UBE2D3P1-201ENST00000436669 444 ntBASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 PPIAP17-201ENST00000438507 471 ntBASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 ELOCP10-201ENST00000440624 327 ntBASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 RPL23AP93-201ENST00000440847 484 ntBASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 MTND3P1-201ENST00000441336 220 ntBASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 AL034418.1-201ENST00000448675 860 ntBASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 RPL21P71-201ENST00000465598 459 ntBASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 RPL23AP65-201ENST00000475608 468 ntBASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 RN7SL41P-201ENST00000476144 297 ntBASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 ACTG1P13-201ENST00000486987 1043 ntBASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 AC008897.1-201ENST00000494006 347 ntBASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 AC109445.1-201ENST00000512356 383 ntBASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 RNU6-1225P-201ENST00000516336 65 ntBASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 AL356057.1-201ENST00000533798 831 ntBASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 RN7SL753P-201ENST00000581238 290 ntBASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 MIR4737-201ENST00000583979 81 ntBASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 PIGPP4-201ENST00000584447 307 ntBASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 VN1R82P-201ENST00000601481 356 ntBASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 PSMA6P4-201ENST00000603247 718 ntBASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 AC009220.3-201ENST00000604318 586 ntBASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 ELOCP34-201ENST00000604436 327 ntBASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 AC096553.1-201ENST00000605169 829 ntBASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 AC090246.1-201ENST00000616499 426 ntBASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 MIR6719-201ENST00000622428 87 ntBASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 AL445437.1-201ENST00000623157 3087 ntBASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.59□□□□□ -1.67
TCRBV7S3A2A0A539 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
TCRBV7S3A2A0A539 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
TCRBV7S3A2A0A539 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.59□□□□□ -1.68
TCRBV7S3A2A0A539 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 LINC00622-201ENST00000562811 1570 ntBASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 AC019072.1-201ENST00000604535 1551 ntBASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 AL353743.4-201ENST00000422653 1547 ntBASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 AC109315.1-201ENST00000584143 1347 ntBASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 RNU6-621P-201ENST00000364752 109 ntBASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 RNU1-44P-201ENST00000384453 163 ntBASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 RNU6-1300P-201ENST00000391046 108 ntBASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 AC092642.1-201ENST00000392417 425 ntBASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 AL161909.1-201ENST00000397390 712 ntBASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 RPL21P108-201ENST00000413857 481 ntBASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms