Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC1.84□□□□□ -2.11
LINC01558Q9Y6Z2 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC1.84□□□□□ -2.11
LINC01558Q9Y6Z2 OR13C1P-202ENST00000641378 2919 ntBASIC1.84□□□□□ -2.11
LINC01558Q9Y6Z2 AL353743.4-201ENST00000422653 1547 ntBASIC1.84□□□□□ -2.11
LINC01558Q9Y6Z2 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
LINC01558Q9Y6Z2 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC1.84□□□□□ -2.12
LINC01558Q9Y6Z2 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
LINC01558Q9Y6Z2 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 AC107977.1-201ENST00000355745 939 ntBASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 RSU1P3-201ENST00000412878 835 ntBASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 EEF1B2P8-201ENST00000414101 671 ntBASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 AC245054.2-201ENST00000415639 319 ntBASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 RAD23BP2-201ENST00000416003 1207 ntBASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 GRPEL2P2-201ENST00000421856 670 ntBASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 AL356806.1-201ENST00000422524 916 ntBASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 AC241520.1-201ENST00000422654 1099 ntBASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 NRBF2P3-201ENST00000432731 865 ntBASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 AC093716.1-201ENST00000435923 377 ntBASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 XKRYP6-201ENST00000440468 1116 ntBASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 XKRYP3-201ENST00000442113 1116 ntBASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 AL354872.1-201ENST00000456361 967 ntBASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 AC146507.1-201ENST00000468335 354 ntBASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 AC021205.1-201ENST00000468797 348 ntBASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 RPL35AP19-201ENST00000469425 329 ntBASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 RPL30P11-201ENST00000495304 339 ntBASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 CDV3-208ENST00000511392 554 ntTSL 5 BASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 AC108064.1-201ENST00000513791 460 ntBASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 BX510359.5-201ENST00000515651 304 ntBASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 RNU6-711P-201ENST00000517255 106 ntBASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 IGHVII-49-1-201ENST00000521760 224 ntBASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 AC105233.3-201ENST00000531125 744 ntBASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 HSPE1P20-201ENST00000538133 289 ntBASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 MT1CP-201ENST00000567054 174 ntBASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 AC023043.3-201ENST00000593113 385 ntBASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 AC091057.2-201ENST00000602594 792 ntBASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 AC079315.1-201ENST00000602952 623 ntBASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 AC112200.1-201ENST00000625015 234 ntBASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 AP002907.1-201ENST00000606361 1430 ntBASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
LINC01558Q9Y6Z2 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
LINC01558Q9Y6Z2 AC104966.1-201ENST00000467010 1464 ntBASIC1.82□□□□□ -2.12
LINC01558Q9Y6Z2 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
LINC01558Q9Y6Z2 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC1.82□□□□□ -2.12
LINC01558Q9Y6Z2 AC073055.1-201ENST00000456901 1621 ntBASIC1.82□□□□□ -2.12
LINC01558Q9Y6Z2 AC008033.1-201ENST00000216407 1162 ntBASIC1.82□□□□□ -2.12
LINC01558Q9Y6Z2 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC1.82□□□□□ -2.12
LINC01558Q9Y6Z2 RNU1-109P-201ENST00000383960 147 ntBASIC1.82□□□□□ -2.12
LINC01558Q9Y6Z2 MIR659-201ENST00000384963 97 ntBASIC1.82□□□□□ -2.12
LINC01558Q9Y6Z2 MIR199A2-201ENST00000385289 110 ntBASIC1.82□□□□□ -2.12
LINC01558Q9Y6Z2 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
LINC01558Q9Y6Z2 CD3D-202ENST00000392884 476 ntTSL 2 BASIC1.82□□□□□ -2.12
LINC01558Q9Y6Z2 AL139095.1-201ENST00000404326 391 ntBASIC1.82□□□□□ -2.12
LINC01558Q9Y6Z2 U3.39-201ENST00000408569 239 ntBASIC1.82□□□□□ -2.12
LINC01558Q9Y6Z2 RNA5SP492-201ENST00000411330 114 ntBASIC1.82□□□□□ -2.12
LINC01558Q9Y6Z2 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC1.82□□□□□ -2.12
LINC01558Q9Y6Z2 AL096701.2-201ENST00000416920 238 ntBASIC1.82□□□□□ -2.12
LINC01558Q9Y6Z2 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC1.82□□□□□ -2.12
LINC01558Q9Y6Z2 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC1.82□□□□□ -2.12
LINC01558Q9Y6Z2 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC1.82□□□□□ -2.12
LINC01558Q9Y6Z2 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC1.82□□□□□ -2.12
LINC01558Q9Y6Z2 VDAC1P3-201ENST00000434069 851 ntBASIC1.82□□□□□ -2.12
LINC01558Q9Y6Z2 VN1R54P-201ENST00000435210 1049 ntBASIC1.82□□□□□ -2.12
LINC01558Q9Y6Z2 MUPP-201ENST00000438111 566 ntBASIC1.82□□□□□ -2.12
LINC01558Q9Y6Z2 PA2G4P1-201ENST00000442248 1197 ntBASIC1.82□□□□□ -2.12
LINC01558Q9Y6Z2 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC1.82□□□□□ -2.12
LINC01558Q9Y6Z2 NOTCH2P1-201ENST00000443481 624 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms