Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 SNORA73.1-201ENST00000363107 205 ntBASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 RSL24D1P4-201ENST00000400938 484 ntBASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 FABP12P1-201ENST00000401911 322 ntBASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 HSFY4P-201ENST00000415994 1181 ntBASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 AC011233.1-201ENST00000422812 283 ntBASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 MTCO1P3-201ENST00000429327 192 ntBASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 AC091390.1-201ENST00000433904 331 ntBASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 AC096638.2-201ENST00000434965 711 ntBASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 GTF2IP7-202ENST00000436677 309 ntBASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 YWHAZP7-201ENST00000436906 631 ntBASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 THAP5P1-201ENST00000439089 262 ntBASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 ATP5C1P1-201ENST00000441945 895 ntBASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 AC118469.1-201ENST00000442943 488 ntBASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 MTND2P4-201ENST00000445034 1004 ntBASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 MTCO2P7-201ENST00000446518 666 ntBASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 RPL10P17-201ENST00000453852 316 ntBASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 AL133244.1-201ENST00000456007 258 ntBASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 AC037198.2-201ENST00000478845 733 ntBASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 AC104971.1-201ENST00000495117 578 ntBASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 AK3P4-201ENST00000504283 583 ntBASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 AC111000.2-201ENST00000507775 550 ntBASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 AP000619.3-201ENST00000535634 1127 ntBASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 DYNLL1P4-201ENST00000549314 266 ntBASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 MIR4666A-201ENST00000580160 79 ntBASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 VN1R88P-201ENST00000596787 292 ntBASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 DUXAP11-201ENST00000603858 526 ntBASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 AC090525.3-201ENST00000605601 189 ntBASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 AC010424.2-201ENST00000607594 443 ntBASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 AL354976.1-201ENST00000613843 387 ntBASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 AL596275.2-204ENST00000641628 552 ntBASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 AL596275.2-206ENST00000641957 626 ntBASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 SGO1P2-201ENST00000429458 1589 ntBASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 AP005901.5-201ENST00000545779 1796 ntBASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.19□□□□□ -1.58
SSX2IPQ9Y2D8 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 AC093311.1-201ENST00000506586 2021 ntBASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 Y_RNA.192-201ENST00000363977 102 ntBASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 SNORA62.2-201ENST00000364672 152 ntBASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 RNA5SP332-201ENST00000391063 115 ntBASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 AC093719.1-202ENST00000392735 373 ntBASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 RNU6-77P-201ENST00000410554 91 ntBASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 RPL36AP10-201ENST00000421785 322 ntBASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 RPL21P43-201ENST00000425440 472 ntBASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 AL162591.2-201ENST00000449634 317 ntBASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 DNAJC19P8-201ENST00000452887 259 ntBASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 RNU7-125P-201ENST00000458760 62 ntBASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 AC092754.2-201ENST00000463506 460 ntBASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 FTH1P2-201ENST00000466086 412 ntBASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 AC073522.1-201ENST00000483312 377 ntBASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 LINC00888-204ENST00000487386 421 ntBASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 OR2A20P-203ENST00000498397 1268 ntBASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 SCARNA22-201ENST00000503991 125 ntBASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 AC073358.1-201ENST00000505671 684 ntBASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 AC111000.3-201ENST00000508057 576 ntBASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms