Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 VN1R25P-201ENST00000443385 738 ntBASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 AC023512.1-201ENST00000444513 499 ntBASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 VN1R40P-201ENST00000455196 941 ntBASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 RPS7P7-201ENST00000463499 571 ntBASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 AC021205.1-201ENST00000468797 348 ntBASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 RN7SL385P-201ENST00000468873 276 ntBASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 MTND6P6-201ENST00000478031 263 ntBASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 USP9YP5-201ENST00000511770 630 ntBASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 HMGB1P46-201ENST00000520062 610 ntBASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 PARP1P2-201ENST00000556806 195 ntBASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 AC022968.1-201ENST00000567372 442 ntBASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 AC040174.2-201ENST00000602701 465 ntBASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 RNU4-89P-201ENST00000607443 133 ntBASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 AL356490.1-201ENST00000623079 479 ntBASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 HPVC1-201ENST00000629899 1198 ntBASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 AC119674.1-212ENST00000641155 993 ntBASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 PNPT1P2-201ENST00000456768 2050 ntBASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 AC022893.2-201ENST00000564832 3296 ntBASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 CR381670.1-201ENST00000624291 1693 ntBASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 AL356095.1-201ENST00000417217 199 ntBASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 FAR1P1-201ENST00000427163 934 ntBASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 NPM1P34-201ENST00000428821 893 ntBASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 ZNF965P-201ENST00000432501 817 ntBASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 KCTD9P3-201ENST00000434597 1169 ntBASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 AC114755.5-201ENST00000447760 831 ntBASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 RPL7P31-201ENST00000450192 724 ntBASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 HMGB3P21-201ENST00000452483 547 ntBASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 RPL5P32-201ENST00000454085 879 ntBASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 RN7SL860P-201ENST00000473738 223 ntBASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 AC092045.1-201ENST00000495716 1231 ntBASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 AC004069.2-201ENST00000505438 1114 ntBASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 MTCO1P31-201ENST00000506355 492 ntBASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 RNU6-347P-201ENST00000516658 105 ntBASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 AC087272.1-201ENST00000523624 533 ntBASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 MIR4716-201ENST00000579628 84 ntBASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 uc_338.32-201ENST00000615087 172 ntBASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 AC025016.1-201ENST00000616746 682 ntBASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 AC145207.9-201ENST00000623802 325 ntBASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 TNPO1P3-201ENST00000436471 2662 ntBASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TRAPPC4Q9Y296 CASC19-261ENST00000641853 1638 ntBASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 AL121657.1-201ENST00000327215 531 ntBASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 SNORD115-48-201ENST00000364764 76 ntBASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 RNU6-532P-201ENST00000384318 107 ntBASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 RN7SKP222-201ENST00000410651 315 ntBASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 RPL21P109-201ENST00000422213 475 ntBASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 AC073464.3-201ENST00000422564 712 ntBASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 MTND4P24-201ENST00000424002 397 ntBASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 OR5BE1P-201ENST00000425977 939 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms