Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHANK2Q9UPX8 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.35□□□□□ -1.55
SHANK2Q9UPX8 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC5.35□□□□□ -1.55
SHANK2Q9UPX8 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
SHANK2Q9UPX8 MTND4LP20-201ENST00000402379 270 ntBASIC5.34□□□□□ -1.55
SHANK2Q9UPX8 RPL21P109-201ENST00000422213 475 ntBASIC5.34□□□□□ -1.55
SHANK2Q9UPX8 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.34□□□□□ -1.55
SHANK2Q9UPX8 AP000942.1-201ENST00000463969 747 ntBASIC5.34□□□□□ -1.55
SHANK2Q9UPX8 TMED11P-201ENST00000479478 690 ntBASIC5.34□□□□□ -1.55
SHANK2Q9UPX8 AC096576.1-201ENST00000489014 359 ntBASIC5.34□□□□□ -1.55
SHANK2Q9UPX8 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.34□□□□□ -1.55
SHANK2Q9UPX8 IGHV3-32-201ENST00000519182 355 ntBASIC5.34□□□□□ -1.55
SHANK2Q9UPX8 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.34□□□□□ -1.55
SHANK2Q9UPX8 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC5.34□□□□□ -1.55
SHANK2Q9UPX8 KLKP1-201ENST00000595979 403 ntBASIC5.34□□□□□ -1.55
SHANK2Q9UPX8 AC006386.2-201ENST00000624491 75 ntBASIC5.34□□□□□ -1.55
SHANK2Q9UPX8 AC012005.1-201ENST00000624575 75 ntBASIC5.34□□□□□ -1.55
SHANK2Q9UPX8 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.34□□□□□ -1.55
SHANK2Q9UPX8 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
SHANK2Q9UPX8 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
SHANK2Q9UPX8 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
SHANK2Q9UPX8 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
SHANK2Q9UPX8 UBE2V1P2-201ENST00000397758 440 ntBASIC5.33□□□□□ -1.56
SHANK2Q9UPX8 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.33□□□□□ -1.56
SHANK2Q9UPX8 JKAMPP1-201ENST00000413804 919 ntBASIC5.33□□□□□ -1.56
SHANK2Q9UPX8 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC5.33□□□□□ -1.56
SHANK2Q9UPX8 PHBP14-201ENST00000512887 367 ntBASIC5.33□□□□□ -1.56
SHANK2Q9UPX8 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.33□□□□□ -1.56
SHANK2Q9UPX8 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC5.33□□□□□ -1.56
SHANK2Q9UPX8 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.33□□□□□ -1.56
SHANK2Q9UPX8 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC5.33□□□□□ -1.56
SHANK2Q9UPX8 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC5.33□□□□□ -1.56
SHANK2Q9UPX8 AC023389.2-201ENST00000580031 955 ntBASIC5.33□□□□□ -1.56
SHANK2Q9UPX8 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.33□□□□□ -1.56
SHANK2Q9UPX8 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC5.33□□□□□ -1.56
SHANK2Q9UPX8 SAGE2P-201ENST00000420011 2126 ntBASIC5.33□□□□□ -1.56
SHANK2Q9UPX8 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SHANK2Q9UPX8 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHANK2Q9UPX8 AC118273.1-201ENST00000525324 3006 ntBASIC5.33□□□□□ -1.56
SHANK2Q9UPX8 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC5.33□□□□□ -1.56
SHANK2Q9UPX8 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC5.33□□□□□ -1.56
SHANK2Q9UPX8 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SHANK2Q9UPX8 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC5.33□□□□□ -1.56
SHANK2Q9UPX8 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
SHANK2Q9UPX8 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SHANK2Q9UPX8 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHANK2Q9UPX8 RNA5SP374-201ENST00000362939 125 ntBASIC5.32□□□□□ -1.56
SHANK2Q9UPX8 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SHANK2Q9UPX8 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
SHANK2Q9UPX8 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC5.32□□□□□ -1.56
SHANK2Q9UPX8 HMGB3P22-202ENST00000451823 572 ntBASIC5.32□□□□□ -1.56
SHANK2Q9UPX8 RPS26P15-201ENST00000488067 348 ntBASIC5.32□□□□□ -1.56
SHANK2Q9UPX8 AC097462.2-201ENST00000504623 481 ntBASIC5.32□□□□□ -1.56
SHANK2Q9UPX8 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.32□□□□□ -1.56
SHANK2Q9UPX8 AC005476.1-201ENST00000554427 397 ntBASIC5.32□□□□□ -1.56
SHANK2Q9UPX8 AC009303.3-201ENST00000591103 736 ntBASIC5.32□□□□□ -1.56
SHANK2Q9UPX8 EIF1P6-201ENST00000600054 334 ntBASIC5.32□□□□□ -1.56
SHANK2Q9UPX8 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.32□□□□□ -1.56
SHANK2Q9UPX8 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC5.32□□□□□ -1.56
SHANK2Q9UPX8 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SHANK2Q9UPX8 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SHANK2Q9UPX8 BTBD10P1-201ENST00000549824 1352 ntBASIC5.32□□□□□ -1.56
SHANK2Q9UPX8 AC090337.1-201ENST00000579651 2074 ntBASIC5.32□□□□□ -1.56
SHANK2Q9UPX8 AL031595.2-201ENST00000624215 19071 ntBASIC5.32□□□□□ -1.56
SHANK2Q9UPX8 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
SHANK2Q9UPX8 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHANK2Q9UPX8 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SHANK2Q9UPX8 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
SHANK2Q9UPX8 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHANK2Q9UPX8 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.32□□□□□ -1.56
SHANK2Q9UPX8 RNA5SP126-201ENST00000365092 109 ntBASIC5.32□□□□□ -1.56
SHANK2Q9UPX8 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC5.32□□□□□ -1.56
SHANK2Q9UPX8 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC5.32□□□□□ -1.56
SHANK2Q9UPX8 AC233982.1-201ENST00000451247 436 ntBASIC5.32□□□□□ -1.56
SHANK2Q9UPX8 RN7SL594P-201ENST00000470590 287 ntBASIC5.32□□□□□ -1.56
SHANK2Q9UPX8 FTH1P24-201ENST00000503502 462 ntBASIC5.32□□□□□ -1.56
SHANK2Q9UPX8 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC5.32□□□□□ -1.56
SHANK2Q9UPX8 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.32□□□□□ -1.56
SHANK2Q9UPX8 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.32□□□□□ -1.56
SHANK2Q9UPX8 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHANK2Q9UPX8 MIR5186-201ENST00000577504 120 ntBASIC5.32□□□□□ -1.56
SHANK2Q9UPX8 AC104984.5-201ENST00000586878 94 ntBASIC5.32□□□□□ -1.56
SHANK2Q9UPX8 MIR6715A-201ENST00000615929 79 ntBASIC5.32□□□□□ -1.56
SHANK2Q9UPX8 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC5.32□□□□□ -1.56
SHANK2Q9UPX8 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHANK2Q9UPX8 SRP72P2-201ENST00000344851 1979 ntBASIC5.31□□□□□ -1.56
SHANK2Q9UPX8 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHANK2Q9UPX8 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.31□□□□□ -1.56
SHANK2Q9UPX8 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHANK2Q9UPX8 AL139095.1-201ENST00000404326 391 ntBASIC5.31□□□□□ -1.56
SHANK2Q9UPX8 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.31□□□□□ -1.56
SHANK2Q9UPX8 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC5.31□□□□□ -1.56
SHANK2Q9UPX8 AL671855.1-201ENST00000446875 1203 ntBASIC5.31□□□□□ -1.56
SHANK2Q9UPX8 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.31□□□□□ -1.56
SHANK2Q9UPX8 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC5.31□□□□□ -1.56
SHANK2Q9UPX8 HIGD1AP3-201ENST00000515857 278 ntBASIC5.31□□□□□ -1.56
SHANK2Q9UPX8 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.31□□□□□ -1.56
SHANK2Q9UPX8 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.31□□□□□ -1.56
SHANK2Q9UPX8 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.31□□□□□ -1.56
SHANK2Q9UPX8 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms