Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 OR11H5P-202ENST00000641612 1325 ntBASIC4.73□□□□□ -1.65
CTNNA3Q9UI47 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CTNNA3Q9UI47 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.73□□□□□ -1.65
CTNNA3Q9UI47 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.73□□□□□ -1.65
CTNNA3Q9UI47 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CTNNA3Q9UI47 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.73□□□□□ -1.65
CTNNA3Q9UI47 AMD1P2-201ENST00000412936 992 ntBASIC4.73□□□□□ -1.65
CTNNA3Q9UI47 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.73□□□□□ -1.65
CTNNA3Q9UI47 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.73□□□□□ -1.65
CTNNA3Q9UI47 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.73□□□□□ -1.65
CTNNA3Q9UI47 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.73□□□□□ -1.65
CTNNA3Q9UI47 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.73□□□□□ -1.65
CTNNA3Q9UI47 AP000926.1-201ENST00000479573 241 ntBASIC4.73□□□□□ -1.65
CTNNA3Q9UI47 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.73□□□□□ -1.65
CTNNA3Q9UI47 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.73□□□□□ -1.65
CTNNA3Q9UI47 AC109458.1-201ENST00000508858 316 ntBASIC4.73□□□□□ -1.65
CTNNA3Q9UI47 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CTNNA3Q9UI47 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.73□□□□□ -1.65
CTNNA3Q9UI47 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.73□□□□□ -1.65
CTNNA3Q9UI47 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.73□□□□□ -1.65
CTNNA3Q9UI47 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.73□□□□□ -1.65
CTNNA3Q9UI47 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.73□□□□□ -1.65
CTNNA3Q9UI47 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CTNNA3Q9UI47 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CTNNA3Q9UI47 AC053481.4-201ENST00000583164 216 ntBASIC4.73□□□□□ -1.65
CTNNA3Q9UI47 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.73□□□□□ -1.65
CTNNA3Q9UI47 AL591424.2-201ENST00000617023 128 ntBASIC4.73□□□□□ -1.65
CTNNA3Q9UI47 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.73□□□□□ -1.65
CTNNA3Q9UI47 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CTNNA3Q9UI47 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CTNNA3Q9UI47 AP002001.2-201ENST00000529025 1469 ntBASIC4.73□□□□□ -1.65
CTNNA3Q9UI47 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CTNNA3Q9UI47 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.72□□□□□ -1.65
CTNNA3Q9UI47 HSPA8P1-201ENST00000425843 1833 ntBASIC4.72□□□□□ -1.65
CTNNA3Q9UI47 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.72□□□□□ -1.65
CTNNA3Q9UI47 AL161912.2-201ENST00000565707 3007 ntBASIC4.72□□□□□ -1.65
CTNNA3Q9UI47 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.72□□□□□ -1.65
CTNNA3Q9UI47 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.72□□□□□ -1.65
CTNNA3Q9UI47 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.72□□□□□ -1.65
CTNNA3Q9UI47 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.72□□□□□ -1.65
CTNNA3Q9UI47 BTF3P9-201ENST00000418784 283 ntBASIC4.72□□□□□ -1.65
CTNNA3Q9UI47 KCTD9P3-201ENST00000434597 1169 ntBASIC4.72□□□□□ -1.65
CTNNA3Q9UI47 AC096638.2-201ENST00000434965 711 ntBASIC4.72□□□□□ -1.65
CTNNA3Q9UI47 AC083863.1-201ENST00000438811 231 ntBASIC4.72□□□□□ -1.65
CTNNA3Q9UI47 AL162151.2-201ENST00000448875 158 ntBASIC4.72□□□□□ -1.65
CTNNA3Q9UI47 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.72□□□□□ -1.65
CTNNA3Q9UI47 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.72□□□□□ -1.65
CTNNA3Q9UI47 RPS3AP6-201ENST00000484430 795 ntBASIC4.72□□□□□ -1.65
CTNNA3Q9UI47 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.72□□□□□ -1.65
CTNNA3Q9UI47 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.72□□□□□ -1.65
CTNNA3Q9UI47 AC108064.1-201ENST00000513791 460 ntBASIC4.72□□□□□ -1.65
CTNNA3Q9UI47 RNA5SP179-201ENST00000517284 121 ntBASIC4.72□□□□□ -1.65
CTNNA3Q9UI47 AC022790.1-201ENST00000522872 204 ntBASIC4.72□□□□□ -1.65
CTNNA3Q9UI47 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.72□□□□□ -1.65
CTNNA3Q9UI47 AC135001.1-201ENST00000544546 283 ntBASIC4.72□□□□□ -1.65
CTNNA3Q9UI47 YPEL5P3-201ENST00000547227 352 ntBASIC4.72□□□□□ -1.65
CTNNA3Q9UI47 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.72□□□□□ -1.65
CTNNA3Q9UI47 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.72□□□□□ -1.65
CTNNA3Q9UI47 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.72□□□□□ -1.65
CTNNA3Q9UI47 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.72□□□□□ -1.65
CTNNA3Q9UI47 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.72□□□□□ -1.65
CTNNA3Q9UI47 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.72□□□□□ -1.65
CTNNA3Q9UI47 AL139286.1-201ENST00000604465 483 ntBASIC4.72□□□□□ -1.65
CTNNA3Q9UI47 AC091167.4-201ENST00000605079 184 ntBASIC4.72□□□□□ -1.65
CTNNA3Q9UI47 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.72□□□□□ -1.65
CTNNA3Q9UI47 AC116563.2-201ENST00000624751 535 ntBASIC4.72□□□□□ -1.65
CTNNA3Q9UI47 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.72□□□□□ -1.65
CTNNA3Q9UI47 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CTNNA3Q9UI47 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CTNNA3Q9UI47 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.72□□□□□ -1.65
CTNNA3Q9UI47 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
CTNNA3Q9UI47 AL136964.1-201ENST00000622038 2990 ntBASIC4.71□□□□□ -1.65
CTNNA3Q9UI47 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.71□□□□□ -1.65
CTNNA3Q9UI47 AC106871.1-201ENST00000568324 3102 ntBASIC4.71□□□□□ -1.66
CTNNA3Q9UI47 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.71□□□□□ -1.66
CTNNA3Q9UI47 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.71□□□□□ -1.66
CTNNA3Q9UI47 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
CTNNA3Q9UI47 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.71□□□□□ -1.66
CTNNA3Q9UI47 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CTNNA3Q9UI47 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.71□□□□□ -1.66
CTNNA3Q9UI47 RNA5SP239-201ENST00000410218 129 ntBASIC4.71□□□□□ -1.66
CTNNA3Q9UI47 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.71□□□□□ -1.66
CTNNA3Q9UI47 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.71□□□□□ -1.66
CTNNA3Q9UI47 AC011742.1-201ENST00000431448 434 ntBASIC4.71□□□□□ -1.66
CTNNA3Q9UI47 TBCAP1-201ENST00000436520 327 ntBASIC4.71□□□□□ -1.66
CTNNA3Q9UI47 RPL21P11-201ENST00000461458 483 ntBASIC4.71□□□□□ -1.66
CTNNA3Q9UI47 NPM1P41-201ENST00000512920 831 ntBASIC4.71□□□□□ -1.66
CTNNA3Q9UI47 AC117525.1-201ENST00000515228 503 ntBASIC4.71□□□□□ -1.66
CTNNA3Q9UI47 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.71□□□□□ -1.66
CTNNA3Q9UI47 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.71□□□□□ -1.66
CTNNA3Q9UI47 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.71□□□□□ -1.66
CTNNA3Q9UI47 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.71□□□□□ -1.66
CTNNA3Q9UI47 MRPS35P3-201ENST00000603189 709 ntBASIC4.71□□□□□ -1.66
CTNNA3Q9UI47 ABI1P1-201ENST00000603375 1120 ntBASIC4.71□□□□□ -1.66
CTNNA3Q9UI47 AC004777.1-201ENST00000624317 287 ntBASIC4.71□□□□□ -1.66
CTNNA3Q9UI47 AC112200.1-201ENST00000625015 234 ntBASIC4.71□□□□□ -1.66
CTNNA3Q9UI47 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CTNNA3Q9UI47 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
CTNNA3Q9UI47 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CTNNA3Q9UI47 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms