Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CHD7Q9P2D1 RNU1-18P-201ENST00000363062 164 ntBASIC3.55□□□□□ -1.84
CHD7Q9P2D1 HMGB3P20-201ENST00000417997 600 ntBASIC3.55□□□□□ -1.84
CHD7Q9P2D1 BX119904.1-201ENST00000432026 348 ntBASIC3.55□□□□□ -1.84
CHD7Q9P2D1 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.55□□□□□ -1.84
CHD7Q9P2D1 RPS4XP2-201ENST00000458402 793 ntBASIC3.55□□□□□ -1.84
CHD7Q9P2D1 RPS29P26-201ENST00000477483 171 ntBASIC3.55□□□□□ -1.84
CHD7Q9P2D1 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.55□□□□□ -1.84
CHD7Q9P2D1 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC3.55□□□□□ -1.84
CHD7Q9P2D1 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CHD7Q9P2D1 DPPA3P2-201ENST00000553589 478 ntBASIC3.55□□□□□ -1.84
CHD7Q9P2D1 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.55□□□□□ -1.84
CHD7Q9P2D1 AC104984.5-201ENST00000586878 94 ntBASIC3.55□□□□□ -1.84
CHD7Q9P2D1 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CHD7Q9P2D1 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CHD7Q9P2D1 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CHD7Q9P2D1 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
CHD7Q9P2D1 HCFC2P1-201ENST00000392864 1592 ntBASIC3.55□□□□□ -1.84
CHD7Q9P2D1 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CHD7Q9P2D1 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
CHD7Q9P2D1 OR56A5-201ENST00000340110 738 ntBASIC3.54□□□□□ -1.84
CHD7Q9P2D1 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.54□□□□□ -1.84
CHD7Q9P2D1 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.54□□□□□ -1.84
CHD7Q9P2D1 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.54□□□□□ -1.84
CHD7Q9P2D1 OR2A20P-203ENST00000498397 1268 ntBASIC3.54□□□□□ -1.84
CHD7Q9P2D1 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.54□□□□□ -1.84
CHD7Q9P2D1 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.54□□□□□ -1.84
CHD7Q9P2D1 AL157394.1-201ENST00000562983 1224 ntBASIC3.54□□□□□ -1.84
CHD7Q9P2D1 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.54□□□□□ -1.84
CHD7Q9P2D1 AL355596.1-201ENST00000565399 3996 ntBASIC3.54□□□□□ -1.84
CHD7Q9P2D1 CR383658.2-201ENST00000547576 1525 ntBASIC3.54□□□□□ -1.84
CHD7Q9P2D1 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CHD7Q9P2D1 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.54□□□□□ -1.84
CHD7Q9P2D1 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CHD7Q9P2D1 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CHD7Q9P2D1 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CHD7Q9P2D1 SNORA7.4-201ENST00000384249 137 ntBASIC3.54□□□□□ -1.84
CHD7Q9P2D1 NACAP7-201ENST00000407371 609 ntBASIC3.54□□□□□ -1.84
CHD7Q9P2D1 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.54□□□□□ -1.84
CHD7Q9P2D1 RPS29P31-201ENST00000446147 164 ntBASIC3.54□□□□□ -1.84
CHD7Q9P2D1 TRBV12-2-201ENST00000489763 344 ntBASIC3.54□□□□□ -1.84
CHD7Q9P2D1 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.54□□□□□ -1.84
CHD7Q9P2D1 NDUFB9P3-201ENST00000521269 501 ntBASIC3.54□□□□□ -1.84
CHD7Q9P2D1 PSMA2P1-201ENST00000526365 646 ntBASIC3.54□□□□□ -1.84
CHD7Q9P2D1 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.54□□□□□ -1.84
CHD7Q9P2D1 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CHD7Q9P2D1 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.54□□□□□ -1.84
CHD7Q9P2D1 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
CHD7Q9P2D1 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.54□□□□□ -1.84
CHD7Q9P2D1 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CHD7Q9P2D1 AL022322.2-201ENST00000624072 20397 ntBASIC3.54□□□□□ -1.84
CHD7Q9P2D1 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CHD7Q9P2D1 RNA5SP235-201ENST00000365411 114 ntBASIC3.54□□□□□ -1.84
CHD7Q9P2D1 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.54□□□□□ -1.84
CHD7Q9P2D1 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.54□□□□□ -1.84
CHD7Q9P2D1 AC023598.1-201ENST00000472521 361 ntBASIC3.54□□□□□ -1.84
CHD7Q9P2D1 AL512310.1-201ENST00000548639 172 ntBASIC3.54□□□□□ -1.84
CHD7Q9P2D1 MIR3936-201ENST00000584304 110 ntBASIC3.54□□□□□ -1.84
CHD7Q9P2D1 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.54□□□□□ -1.84
CHD7Q9P2D1 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.54□□□□□ -1.84
CHD7Q9P2D1 Z83843.1-201ENST00000604070 3685 ntBASIC3.53□□□□□ -1.84
CHD7Q9P2D1 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CHD7Q9P2D1 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CHD7Q9P2D1 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.53□□□□□ -1.84
CHD7Q9P2D1 AC084357.1-201ENST00000473404 255 ntBASIC3.53□□□□□ -1.84
CHD7Q9P2D1 RPS3AP43-201ENST00000479743 781 ntBASIC3.53□□□□□ -1.84
CHD7Q9P2D1 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.53□□□□□ -1.84
CHD7Q9P2D1 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC3.53□□□□□ -1.84
CHD7Q9P2D1 AC005183.1-201ENST00000603687 1979 ntBASIC3.53□□□□□ -1.84
CHD7Q9P2D1 NAMPTP1-201ENST00000440465 2514 ntBASIC3.53□□□□□ -1.84
CHD7Q9P2D1 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC3.53□□□□□ -1.84
CHD7Q9P2D1 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CHD7Q9P2D1 AL139132.1-201ENST00000431587 344 ntBASIC3.53□□□□□ -1.84
CHD7Q9P2D1 NPM1P13-201ENST00000452663 865 ntBASIC3.53□□□□□ -1.84
CHD7Q9P2D1 TPT1P1-201ENST00000458495 518 ntBASIC3.53□□□□□ -1.84
CHD7Q9P2D1 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.53□□□□□ -1.84
CHD7Q9P2D1 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.53□□□□□ -1.84
CHD7Q9P2D1 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.53□□□□□ -1.84
CHD7Q9P2D1 AL133457.1-201ENST00000564251 987 ntBASIC3.53□□□□□ -1.84
CHD7Q9P2D1 AC026979.4-201ENST00000606555 645 ntBASIC3.53□□□□□ -1.84
CHD7Q9P2D1 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.53□□□□□ -1.84
CHD7Q9P2D1 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CHD7Q9P2D1 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC3.53□□□□□ -1.85
CHD7Q9P2D1 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.85
CHD7Q9P2D1 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CHD7Q9P2D1 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC3.52□□□□□ -1.85
CHD7Q9P2D1 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CHD7Q9P2D1 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
CHD7Q9P2D1 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.52□□□□□ -1.85
CHD7Q9P2D1 EEF1A1P41-201ENST00000414667 207 ntBASIC3.52□□□□□ -1.85
CHD7Q9P2D1 HMGB3P13-201ENST00000511263 607 ntBASIC3.52□□□□□ -1.85
CHD7Q9P2D1 RNU6-237P-201ENST00000515985 71 ntBASIC3.52□□□□□ -1.85
CHD7Q9P2D1 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.52□□□□□ -1.85
CHD7Q9P2D1 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.52□□□□□ -1.85
CHD7Q9P2D1 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CHD7Q9P2D1 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.52□□□□□ -1.85
CHD7Q9P2D1 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC3.52□□□□□ -1.85
CHD7Q9P2D1 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CHD7Q9P2D1 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CHD7Q9P2D1 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 152.1 ms