Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC016772.1-201ENST00000444170 1261 ntBASIC4.72□□□□□ -1.65
LRFN1Q9P244 VN1R10P-201ENST00000447106 875 ntBASIC4.72□□□□□ -1.65
LRFN1Q9P244 NOP56P2-201ENST00000447491 769 ntBASIC4.72□□□□□ -1.65
LRFN1Q9P244 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.72□□□□□ -1.65
LRFN1Q9P244 MTND2P19-201ENST00000449129 1012 ntBASIC4.72□□□□□ -1.65
LRFN1Q9P244 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.72□□□□□ -1.65
LRFN1Q9P244 AL109741.2-201ENST00000455561 343 ntBASIC4.72□□□□□ -1.65
LRFN1Q9P244 ATG12P2-201ENST00000456830 416 ntBASIC4.72□□□□□ -1.65
LRFN1Q9P244 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.72□□□□□ -1.65
LRFN1Q9P244 AC006463.2-201ENST00000473326 348 ntBASIC4.72□□□□□ -1.65
LRFN1Q9P244 OR4G11P-201ENST00000492842 939 ntBASIC4.72□□□□□ -1.65
LRFN1Q9P244 RN7SL591P-201ENST00000496150 292 ntBASIC4.72□□□□□ -1.65
LRFN1Q9P244 RPSAP51-201ENST00000497462 645 ntBASIC4.72□□□□□ -1.65
LRFN1Q9P244 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.72□□□□□ -1.65
LRFN1Q9P244 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.72□□□□□ -1.65
LRFN1Q9P244 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
LRFN1Q9P244 AC119751.5-201ENST00000514077 770 ntBASIC4.72□□□□□ -1.65
LRFN1Q9P244 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.72□□□□□ -1.65
LRFN1Q9P244 RNU6-583P-201ENST00000516012 92 ntBASIC4.72□□□□□ -1.65
LRFN1Q9P244 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.72□□□□□ -1.65
LRFN1Q9P244 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.72□□□□□ -1.65
LRFN1Q9P244 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.72□□□□□ -1.65
LRFN1Q9P244 OR5BC1P-201ENST00000529327 739 ntBASIC4.72□□□□□ -1.65
LRFN1Q9P244 AC092470.1-201ENST00000546187 132 ntBASIC4.72□□□□□ -1.65
LRFN1Q9P244 AL512347.1-201ENST00000566420 503 ntBASIC4.72□□□□□ -1.65
LRFN1Q9P244 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.72□□□□□ -1.65
LRFN1Q9P244 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.72□□□□□ -1.65
LRFN1Q9P244 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.72□□□□□ -1.65
LRFN1Q9P244 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LRFN1Q9P244 AC005084.1-201ENST00000605160 304 ntBASIC4.72□□□□□ -1.65
LRFN1Q9P244 AL360219.1-201ENST00000610230 366 ntBASIC4.72□□□□□ -1.65
LRFN1Q9P244 AC005962.2-201ENST00000611427 652 ntBASIC4.72□□□□□ -1.65
LRFN1Q9P244 MIR6810-201ENST00000622701 70 ntBASIC4.72□□□□□ -1.65
LRFN1Q9P244 AC068057.2-201ENST00000624047 895 ntBASIC4.72□□□□□ -1.65
LRFN1Q9P244 MIR6715B-201ENST00000637172 77 ntBASIC4.72□□□□□ -1.65
LRFN1Q9P244 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.72□□□□□ -1.65
LRFN1Q9P244 SGO1P2-201ENST00000429458 1589 ntBASIC4.72□□□□□ -1.65
LRFN1Q9P244 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.72□□□□□ -1.65
LRFN1Q9P244 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LRFN1Q9P244 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
LRFN1Q9P244 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.72□□□□□ -1.65
LRFN1Q9P244 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
LRFN1Q9P244 INTS6P1-201ENST00000504674 2530 ntBASIC4.72□□□□□ -1.65
LRFN1Q9P244 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.72□□□□□ -1.65
LRFN1Q9P244 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.72□□□□□ -1.65
LRFN1Q9P244 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
LRFN1Q9P244 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
LRFN1Q9P244 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
LRFN1Q9P244 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.71□□□□□ -1.65
LRFN1Q9P244 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.71□□□□□ -1.65
LRFN1Q9P244 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.71□□□□□ -1.66
LRFN1Q9P244 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
LRFN1Q9P244 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
LRFN1Q9P244 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.71□□□□□ -1.66
LRFN1Q9P244 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LRFN1Q9P244 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
LRFN1Q9P244 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.71□□□□□ -1.66
LRFN1Q9P244 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.71□□□□□ -1.66
LRFN1Q9P244 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
LRFN1Q9P244 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.71□□□□□ -1.66
LRFN1Q9P244 SNORA51.8-201ENST00000384234 132 ntBASIC4.71□□□□□ -1.66
LRFN1Q9P244 SNORA70E-201ENST00000384492 135 ntBASIC4.71□□□□□ -1.66
LRFN1Q9P244 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LRFN1Q9P244 MIR1284-201ENST00000408337 120 ntBASIC4.71□□□□□ -1.66
LRFN1Q9P244 OR8G2P-201ENST00000412796 908 ntBASIC4.71□□□□□ -1.66
LRFN1Q9P244 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.71□□□□□ -1.66
LRFN1Q9P244 CYCSP10-201ENST00000417973 294 ntBASIC4.71□□□□□ -1.66
LRFN1Q9P244 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.71□□□□□ -1.66
LRFN1Q9P244 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.71□□□□□ -1.66
LRFN1Q9P244 RPL7AP49-201ENST00000429522 581 ntBASIC4.71□□□□□ -1.66
LRFN1Q9P244 AL591438.1-201ENST00000433508 581 ntBASIC4.71□□□□□ -1.66
LRFN1Q9P244 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.71□□□□□ -1.66
LRFN1Q9P244 AL049745.1-201ENST00000433953 286 ntBASIC4.71□□□□□ -1.66
LRFN1Q9P244 AC092427.1-201ENST00000439177 601 ntBASIC4.71□□□□□ -1.66
LRFN1Q9P244 MTCYBP34-201ENST00000439552 670 ntBASIC4.71□□□□□ -1.66
LRFN1Q9P244 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.71□□□□□ -1.66
LRFN1Q9P244 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.71□□□□□ -1.66
LRFN1Q9P244 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.71□□□□□ -1.66
LRFN1Q9P244 RPL39P6-201ENST00000448289 150 ntBASIC4.71□□□□□ -1.66
LRFN1Q9P244 RPL26P28-201ENST00000451325 435 ntBASIC4.71□□□□□ -1.66
LRFN1Q9P244 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.71□□□□□ -1.66
LRFN1Q9P244 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.71□□□□□ -1.66
LRFN1Q9P244 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.71□□□□□ -1.66
LRFN1Q9P244 COX6B1P5-201ENST00000509843 249 ntBASIC4.71□□□□□ -1.66
LRFN1Q9P244 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.71□□□□□ -1.66
LRFN1Q9P244 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC4.71□□□□□ -1.66
LRFN1Q9P244 EDDM3DP-201ENST00000554692 434 ntBASIC4.71□□□□□ -1.66
LRFN1Q9P244 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.71□□□□□ -1.66
LRFN1Q9P244 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.71□□□□□ -1.66
LRFN1Q9P244 AC005412.1-201ENST00000580812 1049 ntBASIC4.71□□□□□ -1.66
LRFN1Q9P244 AP001180.3-201ENST00000582221 145 ntBASIC4.71□□□□□ -1.66
LRFN1Q9P244 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.71□□□□□ -1.66
LRFN1Q9P244 MIR4691-201ENST00000583764 85 ntBASIC4.71□□□□□ -1.66
LRFN1Q9P244 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.71□□□□□ -1.66
LRFN1Q9P244 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.71□□□□□ -1.66
LRFN1Q9P244 YWHAQP7-201ENST00000603536 658 ntBASIC4.71□□□□□ -1.66
LRFN1Q9P244 AC006270.3-201ENST00000605967 1036 ntBASIC4.71□□□□□ -1.66
LRFN1Q9P244 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.71□□□□□ -1.66
LRFN1Q9P244 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.71□□□□□ -1.66
LRFN1Q9P244 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms