Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 Z99497.1-201ENST00000421282 135 ntBASIC5.58□□□□□ -1.52
VTA1Q9NP79 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC5.58□□□□□ -1.52
VTA1Q9NP79 DNAJC19P7-201ENST00000428811 344 ntBASIC5.58□□□□□ -1.52
VTA1Q9NP79 AC096638.2-201ENST00000434965 711 ntBASIC5.58□□□□□ -1.52
VTA1Q9NP79 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.58□□□□□ -1.52
VTA1Q9NP79 OR52E3P-201ENST00000452083 936 ntBASIC5.58□□□□□ -1.52
VTA1Q9NP79 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.58□□□□□ -1.52
VTA1Q9NP79 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC5.58□□□□□ -1.52
VTA1Q9NP79 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.58□□□□□ -1.52
VTA1Q9NP79 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
VTA1Q9NP79 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.58□□□□□ -1.52
VTA1Q9NP79 RPL7P38-201ENST00000488396 739 ntBASIC5.58□□□□□ -1.52
VTA1Q9NP79 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
VTA1Q9NP79 AC011352.3-201ENST00000505162 593 ntBASIC5.58□□□□□ -1.52
VTA1Q9NP79 RPL7L1P13-201ENST00000511702 739 ntBASIC5.58□□□□□ -1.52
VTA1Q9NP79 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.58□□□□□ -1.52
VTA1Q9NP79 RN7SKP276-201ENST00000516242 268 ntBASIC5.58□□□□□ -1.52
VTA1Q9NP79 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC5.58□□□□□ -1.52
VTA1Q9NP79 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.58□□□□□ -1.52
VTA1Q9NP79 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VTA1Q9NP79 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.58□□□□□ -1.52
VTA1Q9NP79 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.58□□□□□ -1.52
VTA1Q9NP79 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.58□□□□□ -1.52
VTA1Q9NP79 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.58□□□□□ -1.52
VTA1Q9NP79 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.58□□□□□ -1.52
VTA1Q9NP79 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.58□□□□□ -1.52
VTA1Q9NP79 MIR3915-201ENST00000578518 97 ntBASIC5.58□□□□□ -1.52
VTA1Q9NP79 AC209154.1-201ENST00000582156 337 ntBASIC5.58□□□□□ -1.52
VTA1Q9NP79 AP005262.1-201ENST00000582646 997 ntBASIC5.58□□□□□ -1.52
VTA1Q9NP79 MIR4660-201ENST00000583549 74 ntBASIC5.58□□□□□ -1.52
VTA1Q9NP79 AC018714.1-201ENST00000605028 208 ntBASIC5.58□□□□□ -1.52
VTA1Q9NP79 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.58□□□□□ -1.52
VTA1Q9NP79 AC019193.2-201ENST00000610012 634 ntBASIC5.58□□□□□ -1.52
VTA1Q9NP79 AC245297.2-201ENST00000610119 565 ntBASIC5.58□□□□□ -1.52
VTA1Q9NP79 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VTA1Q9NP79 AL607023.1-201ENST00000620045 248 ntBASIC5.58□□□□□ -1.52
VTA1Q9NP79 AC019206.1-201ENST00000621938 425 ntBASIC5.58□□□□□ -1.52
VTA1Q9NP79 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
VTA1Q9NP79 PHKBP1-201ENST00000450951 1951 ntBASIC5.58□□□□□ -1.52
VTA1Q9NP79 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VTA1Q9NP79 AL031595.2-201ENST00000624215 19071 ntBASIC5.58□□□□□ -1.52
VTA1Q9NP79 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
VTA1Q9NP79 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.57□□□□□ -1.52
VTA1Q9NP79 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VTA1Q9NP79 ZNF652P1-201ENST00000442420 1309 ntBASIC5.57□□□□□ -1.52
VTA1Q9NP79 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VTA1Q9NP79 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
VTA1Q9NP79 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VTA1Q9NP79 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
VTA1Q9NP79 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
VTA1Q9NP79 Y_RNA.18-201ENST00000362461 102 ntBASIC5.57□□□□□ -1.52
VTA1Q9NP79 Y_RNA.25-201ENST00000362528 102 ntBASIC5.57□□□□□ -1.52
VTA1Q9NP79 AL021407.1-201ENST00000404531 386 ntBASIC5.57□□□□□ -1.52
VTA1Q9NP79 NCSTNP1-201ENST00000406229 144 ntBASIC5.57□□□□□ -1.52
VTA1Q9NP79 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC5.57□□□□□ -1.52
VTA1Q9NP79 AC114755.2-201ENST00000413520 361 ntBASIC5.57□□□□□ -1.52
VTA1Q9NP79 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VTA1Q9NP79 AC062016.2-201ENST00000420950 676 ntBASIC5.57□□□□□ -1.52
VTA1Q9NP79 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VTA1Q9NP79 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.57□□□□□ -1.52
VTA1Q9NP79 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.57□□□□□ -1.52
VTA1Q9NP79 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC5.57□□□□□ -1.52
VTA1Q9NP79 ELOCP10-201ENST00000440624 327 ntBASIC5.57□□□□□ -1.52
VTA1Q9NP79 MTND2P20-201ENST00000440805 661 ntBASIC5.57□□□□□ -1.52
VTA1Q9NP79 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VTA1Q9NP79 MED28P3-201ENST00000444288 531 ntBASIC5.57□□□□□ -1.52
VTA1Q9NP79 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.57□□□□□ -1.52
VTA1Q9NP79 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.57□□□□□ -1.52
VTA1Q9NP79 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.57□□□□□ -1.52
VTA1Q9NP79 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.57□□□□□ -1.52
VTA1Q9NP79 UBA52P3-201ENST00000491303 382 ntBASIC5.57□□□□□ -1.52
VTA1Q9NP79 ARL4AP1-201ENST00000503220 705 ntBASIC5.57□□□□□ -1.52
VTA1Q9NP79 AC025674.1-201ENST00000507074 324 ntBASIC5.57□□□□□ -1.52
VTA1Q9NP79 ENPP7P9-201ENST00000514456 627 ntBASIC5.57□□□□□ -1.52
VTA1Q9NP79 RNU6-347P-201ENST00000516658 105 ntBASIC5.57□□□□□ -1.52
VTA1Q9NP79 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.57□□□□□ -1.52
VTA1Q9NP79 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.57□□□□□ -1.52
VTA1Q9NP79 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
VTA1Q9NP79 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.57□□□□□ -1.52
VTA1Q9NP79 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.57□□□□□ -1.52
VTA1Q9NP79 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.57□□□□□ -1.52
VTA1Q9NP79 AC022884.2-201ENST00000578535 580 ntBASIC5.57□□□□□ -1.52
VTA1Q9NP79 RN7SL690P-201ENST00000582087 240 ntBASIC5.57□□□□□ -1.52
VTA1Q9NP79 AF131215.7-201ENST00000602443 707 ntBASIC5.57□□□□□ -1.52
VTA1Q9NP79 AC123786.2-201ENST00000603459 275 ntBASIC5.57□□□□□ -1.52
VTA1Q9NP79 ELOCP34-201ENST00000604436 327 ntBASIC5.57□□□□□ -1.52
VTA1Q9NP79 AC006270.3-201ENST00000605967 1036 ntBASIC5.57□□□□□ -1.52
VTA1Q9NP79 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.57□□□□□ -1.52
VTA1Q9NP79 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC5.57□□□□□ -1.52
VTA1Q9NP79 AC123768.4-201ENST00000616244 701 ntBASIC5.57□□□□□ -1.52
VTA1Q9NP79 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VTA1Q9NP79 AC091965.5-201ENST00000624785 342 ntBASIC5.57□□□□□ -1.52
VTA1Q9NP79 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VTA1Q9NP79 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VTA1Q9NP79 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VTA1Q9NP79 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VTA1Q9NP79 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.56□□□□□ -1.52
VTA1Q9NP79 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
VTA1Q9NP79 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.56□□□□□ -1.52
VTA1Q9NP79 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms