Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 RPS26P3-201ENST00000470205 348 ntBASIC4.11□□□□□ -1.75
NXF3Q9H4D5 AC090543.2-201ENST00000483963 348 ntBASIC4.11□□□□□ -1.75
NXF3Q9H4D5 AC004057.1-201ENST00000485827 348 ntBASIC4.11□□□□□ -1.75
NXF3Q9H4D5 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.11□□□□□ -1.75
NXF3Q9H4D5 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.11□□□□□ -1.75
NXF3Q9H4D5 PRELID3BP7-201ENST00000503606 469 ntBASIC4.11□□□□□ -1.75
NXF3Q9H4D5 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.11□□□□□ -1.75
NXF3Q9H4D5 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.11□□□□□ -1.75
NXF3Q9H4D5 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.11□□□□□ -1.75
NXF3Q9H4D5 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.11□□□□□ -1.75
NXF3Q9H4D5 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NXF3Q9H4D5 AC245128.3-201ENST00000594721 748 ntBASIC4.11□□□□□ -1.75
NXF3Q9H4D5 AC084373.1-201ENST00000603311 235 ntBASIC4.11□□□□□ -1.75
NXF3Q9H4D5 AL354760.1-201ENST00000608357 643 ntBASIC4.11□□□□□ -1.75
NXF3Q9H4D5 MIR6075-201ENST00000620782 95 ntBASIC4.11□□□□□ -1.75
NXF3Q9H4D5 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.11□□□□□ -1.75
NXF3Q9H4D5 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.11□□□□□ -1.75
NXF3Q9H4D5 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.11□□□□□ -1.75
NXF3Q9H4D5 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
NXF3Q9H4D5 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.11□□□□□ -1.75
NXF3Q9H4D5 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NXF3Q9H4D5 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.11□□□□□ -1.75
NXF3Q9H4D5 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.11□□□□□ -1.75
NXF3Q9H4D5 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
NXF3Q9H4D5 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.11□□□□□ -1.75
NXF3Q9H4D5 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
NXF3Q9H4D5 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
NXF3Q9H4D5 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
NXF3Q9H4D5 MFSD8-236ENST00000641509 4050 ntBASIC4.1□□□□□ -1.75
NXF3Q9H4D5 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NXF3Q9H4D5 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
NXF3Q9H4D5 RNU6-1279P-201ENST00000383917 103 ntBASIC4.1□□□□□ -1.75
NXF3Q9H4D5 MIR449B-201ENST00000384995 97 ntBASIC4.1□□□□□ -1.75
NXF3Q9H4D5 AL390879.2-203ENST00000426943 1121 ntBASIC4.1□□□□□ -1.75
NXF3Q9H4D5 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NXF3Q9H4D5 AC092013.1-201ENST00000438795 332 ntBASIC4.1□□□□□ -1.75
NXF3Q9H4D5 ARL5AP3-201ENST00000439327 386 ntBASIC4.1□□□□□ -1.75
NXF3Q9H4D5 TPTE2P3-201ENST00000441562 1189 ntBASIC4.1□□□□□ -1.75
NXF3Q9H4D5 AC084198.1-201ENST00000477747 402 ntBASIC4.1□□□□□ -1.75
NXF3Q9H4D5 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.1□□□□□ -1.75
NXF3Q9H4D5 AC026726.1-201ENST00000512859 601 ntBASIC4.1□□□□□ -1.75
NXF3Q9H4D5 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.1□□□□□ -1.75
NXF3Q9H4D5 RN7SKP157-201ENST00000516174 282 ntBASIC4.1□□□□□ -1.75
NXF3Q9H4D5 RNA5SP164-201ENST00000516533 110 ntBASIC4.1□□□□□ -1.75
NXF3Q9H4D5 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.1□□□□□ -1.75
NXF3Q9H4D5 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.1□□□□□ -1.75
NXF3Q9H4D5 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NXF3Q9H4D5 AC084757.1-201ENST00000559987 490 ntBASIC4.1□□□□□ -1.75
NXF3Q9H4D5 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.1□□□□□ -1.75
NXF3Q9H4D5 AC010200.2-201ENST00000605098 235 ntBASIC4.1□□□□□ -1.75
NXF3Q9H4D5 SNORA62.6-201ENST00000606322 83 ntBASIC4.1□□□□□ -1.75
NXF3Q9H4D5 RNU1-30P-201ENST00000606575 163 ntBASIC4.1□□□□□ -1.75
NXF3Q9H4D5 AC092159.4-201ENST00000624944 550 ntBASIC4.1□□□□□ -1.75
NXF3Q9H4D5 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.1□□□□□ -1.75
NXF3Q9H4D5 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
NXF3Q9H4D5 UBE3AP2-201ENST00000429033 2259 ntBASIC4.1□□□□□ -1.75
NXF3Q9H4D5 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
NXF3Q9H4D5 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.1□□□□□ -1.75
NXF3Q9H4D5 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.09□□□□□ -1.75
NXF3Q9H4D5 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NXF3Q9H4D5 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NXF3Q9H4D5 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
NXF3Q9H4D5 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
NXF3Q9H4D5 RNA5SP51-201ENST00000364750 119 ntBASIC4.09□□□□□ -1.75
NXF3Q9H4D5 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
NXF3Q9H4D5 RPS3AP25-201ENST00000411660 793 ntBASIC4.09□□□□□ -1.75
NXF3Q9H4D5 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.09□□□□□ -1.75
NXF3Q9H4D5 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.09□□□□□ -1.75
NXF3Q9H4D5 AJ239321.1-201ENST00000424255 564 ntBASIC4.09□□□□□ -1.75
NXF3Q9H4D5 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.09□□□□□ -1.75
NXF3Q9H4D5 NANOGP6-201ENST00000429190 847 ntBASIC4.09□□□□□ -1.75
NXF3Q9H4D5 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NXF3Q9H4D5 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.09□□□□□ -1.75
NXF3Q9H4D5 SETD6P1-201ENST00000444575 317 ntBASIC4.09□□□□□ -1.75
NXF3Q9H4D5 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.09□□□□□ -1.75
NXF3Q9H4D5 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.09□□□□□ -1.75
NXF3Q9H4D5 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
NXF3Q9H4D5 AC104619.4-201ENST00000510773 249 ntBASIC4.09□□□□□ -1.75
NXF3Q9H4D5 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.09□□□□□ -1.75
NXF3Q9H4D5 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.09□□□□□ -1.75
NXF3Q9H4D5 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
NXF3Q9H4D5 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.09□□□□□ -1.75
NXF3Q9H4D5 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.09□□□□□ -1.75
NXF3Q9H4D5 AC090877.1-201ENST00000561418 344 ntBASIC4.09□□□□□ -1.75
NXF3Q9H4D5 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.09□□□□□ -1.75
NXF3Q9H4D5 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.09□□□□□ -1.75
NXF3Q9H4D5 AL139395.1-201ENST00000603662 160 ntBASIC4.09□□□□□ -1.75
NXF3Q9H4D5 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.09□□□□□ -1.75
NXF3Q9H4D5 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.09□□□□□ -1.75
NXF3Q9H4D5 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NXF3Q9H4D5 ATE1-AS1-202ENST00000636460 506 ntBASIC4.09□□□□□ -1.75
NXF3Q9H4D5 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.09□□□□□ -1.75
NXF3Q9H4D5 AC009093.8-201ENST00000641769 292 ntBASIC4.09□□□□□ -1.75
NXF3Q9H4D5 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NXF3Q9H4D5 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.09□□□□□ -1.76
NXF3Q9H4D5 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
NXF3Q9H4D5 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.08□□□□□ -1.76
NXF3Q9H4D5 AC106871.1-201ENST00000568324 3102 ntBASIC4.08□□□□□ -1.76
NXF3Q9H4D5 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
NXF3Q9H4D5 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms