Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AL606489.2-201ENST00000433886 234 ntBASIC7.15□□□□□ -1.26
TRIM47Q96LD4 RPS3AP52-201ENST00000435639 297 ntBASIC7.15□□□□□ -1.26
TRIM47Q96LD4 AL359955.2-201ENST00000445380 353 ntBASIC7.15□□□□□ -1.26
TRIM47Q96LD4 CALM1P2-201ENST00000452941 448 ntBASIC7.15□□□□□ -1.26
TRIM47Q96LD4 SNX18P26-201ENST00000458433 740 ntBASIC7.15□□□□□ -1.26
TRIM47Q96LD4 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC7.15□□□□□ -1.26
TRIM47Q96LD4 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC7.15□□□□□ -1.26
TRIM47Q96LD4 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC7.15□□□□□ -1.26
TRIM47Q96LD4 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
TRIM47Q96LD4 AP006245.2-201ENST00000522004 300 ntBASIC7.15□□□□□ -1.26
TRIM47Q96LD4 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC7.15□□□□□ -1.26
TRIM47Q96LD4 AC079075.1-201ENST00000559543 878 ntBASIC7.15□□□□□ -1.26
TRIM47Q96LD4 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC7.15□□□□□ -1.26
TRIM47Q96LD4 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC7.15□□□□□ -1.26
TRIM47Q96LD4 AC020916.2-201ENST00000591242 360 ntBASIC7.15□□□□□ -1.26
TRIM47Q96LD4 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
TRIM47Q96LD4 APOOP1-201ENST00000604695 592 ntBASIC7.15□□□□□ -1.26
TRIM47Q96LD4 AL591167.1-201ENST00000607321 456 ntBASIC7.15□□□□□ -1.26
TRIM47Q96LD4 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC7.15□□□□□ -1.26
TRIM47Q96LD4 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC7.15□□□□□ -1.26
TRIM47Q96LD4 AL162373.1-201ENST00000620433 407 ntBASIC7.15□□□□□ -1.26
TRIM47Q96LD4 AL732618.1-201ENST00000623251 301 ntBASIC7.15□□□□□ -1.26
TRIM47Q96LD4 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC7.15□□□□□ -1.26
TRIM47Q96LD4 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
TRIM47Q96LD4 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.15□□□□□ -1.27
TRIM47Q96LD4 AC011369.2-201ENST00000624423 1567 ntBASIC7.15□□□□□ -1.27
TRIM47Q96LD4 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC7.15□□□□□ -1.27
TRIM47Q96LD4 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.27
TRIM47Q96LD4 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
TRIM47Q96LD4 ZNF807-201ENST00000328088 1707 ntBASIC7.15□□□□□ -1.27
TRIM47Q96LD4 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
TRIM47Q96LD4 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.27
TRIM47Q96LD4 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC7.15□□□□□ -1.27
TRIM47Q96LD4 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC7.14□□□□□ -1.27
TRIM47Q96LD4 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC7.14□□□□□ -1.27
TRIM47Q96LD4 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM47Q96LD4 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
TRIM47Q96LD4 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
TRIM47Q96LD4 RN7SKP160-201ENST00000363804 340 ntBASIC7.14□□□□□ -1.27
TRIM47Q96LD4 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
TRIM47Q96LD4 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM47Q96LD4 Y_RNA.608-201ENST00000410647 95 ntBASIC7.14□□□□□ -1.27
TRIM47Q96LD4 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC7.14□□□□□ -1.27
TRIM47Q96LD4 MTCO3P19-201ENST00000415864 321 ntBASIC7.14□□□□□ -1.27
TRIM47Q96LD4 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC7.14□□□□□ -1.27
TRIM47Q96LD4 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC7.14□□□□□ -1.27
TRIM47Q96LD4 DPH3P2-201ENST00000422618 250 ntBASIC7.14□□□□□ -1.27
TRIM47Q96LD4 RPL7P57-201ENST00000423238 740 ntBASIC7.14□□□□□ -1.27
TRIM47Q96LD4 AC104332.1-201ENST00000440471 797 ntBASIC7.14□□□□□ -1.27
TRIM47Q96LD4 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC7.14□□□□□ -1.27
TRIM47Q96LD4 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC7.14□□□□□ -1.27
TRIM47Q96LD4 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC7.14□□□□□ -1.27
TRIM47Q96LD4 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC7.14□□□□□ -1.27
TRIM47Q96LD4 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM47Q96LD4 RPS23P1-201ENST00000491662 432 ntBASIC7.14□□□□□ -1.27
TRIM47Q96LD4 AC010350.1-201ENST00000504908 231 ntBASIC7.14□□□□□ -1.27
TRIM47Q96LD4 GAPDHP56-201ENST00000506031 988 ntBASIC7.14□□□□□ -1.27
TRIM47Q96LD4 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC7.14□□□□□ -1.27
TRIM47Q96LD4 RPL7L1P13-201ENST00000511702 739 ntBASIC7.14□□□□□ -1.27
TRIM47Q96LD4 TEK-204ENST00000519097 3836 ntTSL 2 BASIC7.14□□□□□ -1.27
TRIM47Q96LD4 RANP9-201ENST00000519957 271 ntBASIC7.14□□□□□ -1.27
TRIM47Q96LD4 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM47Q96LD4 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM47Q96LD4 AP000648.1-201ENST00000529682 397 ntBASIC7.14□□□□□ -1.27
TRIM47Q96LD4 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
TRIM47Q96LD4 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC7.14□□□□□ -1.27
TRIM47Q96LD4 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC7.14□□□□□ -1.27
TRIM47Q96LD4 AL121594.2-201ENST00000541658 472 ntBASIC7.14□□□□□ -1.27
TRIM47Q96LD4 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
TRIM47Q96LD4 AL121579.2-201ENST00000555466 590 ntBASIC7.14□□□□□ -1.27
TRIM47Q96LD4 RBM22P12-201ENST00000567098 1255 ntBASIC7.14□□□□□ -1.27
TRIM47Q96LD4 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC7.14□□□□□ -1.27
TRIM47Q96LD4 MIR548AI-201ENST00000579940 88 ntBASIC7.14□□□□□ -1.27
TRIM47Q96LD4 AC110743.1-201ENST00000584870 478 ntBASIC7.14□□□□□ -1.27
TRIM47Q96LD4 SUMO2P15-201ENST00000604285 278 ntBASIC7.14□□□□□ -1.27
TRIM47Q96LD4 AC115286.1-201ENST00000604298 434 ntBASIC7.14□□□□□ -1.27
TRIM47Q96LD4 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC7.14□□□□□ -1.27
TRIM47Q96LD4 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM47Q96LD4 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM47Q96LD4 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM47Q96LD4 AC011455.2-201ENST00000599320 3336 ntBASIC7.14□□□□□ -1.27
TRIM47Q96LD4 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM47Q96LD4 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
TRIM47Q96LD4 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
TRIM47Q96LD4 SAMMSON-213ENST00000641336 1521 ntBASIC7.13□□□□□ -1.27
TRIM47Q96LD4 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
TRIM47Q96LD4 AC079753.1-201ENST00000623243 3868 ntBASIC7.13□□□□□ -1.27
TRIM47Q96LD4 HMGB1P5-201ENST00000255320 642 ntBASIC7.13□□□□□ -1.27
TRIM47Q96LD4 NACAP2-201ENST00000318548 624 ntBASIC7.13□□□□□ -1.27
TRIM47Q96LD4 SNORA70H-201ENST00000383910 135 ntBASIC7.13□□□□□ -1.27
TRIM47Q96LD4 SNORA70J-201ENST00000384182 135 ntBASIC7.13□□□□□ -1.27
TRIM47Q96LD4 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
TRIM47Q96LD4 RPL23AP29-201ENST00000397284 453 ntBASIC7.13□□□□□ -1.27
TRIM47Q96LD4 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC7.13□□□□□ -1.27
TRIM47Q96LD4 AL355433.1-201ENST00000422804 300 ntBASIC7.13□□□□□ -1.27
TRIM47Q96LD4 DNAJB5P1-201ENST00000454004 806 ntBASIC7.13□□□□□ -1.27
TRIM47Q96LD4 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC7.13□□□□□ -1.27
TRIM47Q96LD4 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC7.13□□□□□ -1.27
TRIM47Q96LD4 RN7SL165P-201ENST00000477476 291 ntBASIC7.13□□□□□ -1.27
TRIM47Q96LD4 RPL7P38-201ENST00000488396 739 ntBASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms