Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AL590240.1-201ENST00000334118 313 ntBASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 MIR217-201ENST00000384817 110 ntBASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 RNU6-1300P-201ENST00000391046 108 ntBASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 AL133264.1-201ENST00000407157 562 ntBASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 AC006960.1-201ENST00000419980 153 ntBASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 Z93242.1-201ENST00000427102 353 ntBASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 AL008629.1-201ENST00000438615 184 ntBASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 MTCO2P25-201ENST00000447065 681 ntBASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 AL034418.1-201ENST00000448675 860 ntBASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 COX6CP18-201ENST00000448769 222 ntBASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 UBA52P3-201ENST00000491303 382 ntBASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 AC093534.1-201ENST00000504977 132 ntBASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 AC116353.3-201ENST00000511215 249 ntBASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 RNU6-885P-201ENST00000516607 104 ntBASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 RN7SKP96-201ENST00000516948 297 ntBASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 SMARCE1P4-201ENST00000523647 241 ntBASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 AP000619.3-201ENST00000535634 1127 ntBASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 EDDM3DP-201ENST00000554692 434 ntBASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 AC087465.1-201ENST00000560574 245 ntBASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 AC017100.2-201ENST00000584628 355 ntBASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 AC096553.1-201ENST00000605169 829 ntBASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 AC080013.3-201ENST00000606839 578 ntBASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 AC097065.2-201ENST00000608159 533 ntBASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 AC123768.4-201ENST00000616244 701 ntBASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 AC015871.5-202ENST00000623252 701 ntBASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 AL592182.3-201ENST00000642132 3304 ntBASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 DDX18P3-201ENST00000404856 2007 ntBASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 AC016716.1-201ENST00000265882 708 ntBASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 RNU6-1066P-201ENST00000363573 105 ntBASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 RNU1-82P-201ENST00000390851 165 ntBASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 U3.30-201ENST00000391308 210 ntBASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 AL139098.1-201ENST00000407291 389 ntBASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 RNA5SP113-201ENST00000410486 84 ntBASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 AC114755.2-201ENST00000413520 361 ntBASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 RPL7P53-201ENST00000421245 739 ntBASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 AL031736.2-201ENST00000426573 787 ntBASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 OR6K5P-201ENST00000447050 945 ntBASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 AC104651.2-201ENST00000447549 528 ntBASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 AL133477.1-201ENST00000457472 514 ntBASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 AL445433.1-201ENST00000457507 257 ntBASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 AP000563.1-201ENST00000490865 758 ntBASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 MTCYBP16-201ENST00000509187 1129 ntBASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 OR5H4P-201ENST00000510851 923 ntBASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 HIGD1AP5-201ENST00000529959 259 ntBASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 PDCL2P2-201ENST00000533651 189 ntBASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 AC133555.2-201ENST00000550213 292 ntBASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 CR383656.6-201ENST00000550518 394 ntBASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 GTF2IP8-201ENST00000560687 584 ntBASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 AC093249.4-201ENST00000564755 259 ntBASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 MIR4330-201ENST00000579077 105 ntBASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 AC110743.1-201ENST00000584870 478 ntBASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 AC008745.1-201ENST00000604064 271 ntBASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 AL451074.6-201ENST00000608512 729 ntBASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 FAM27B-201ENST00000610601 213 ntBASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 AC023158.2-201ENST00000614876 543 ntBASIC5.69□□□□□ -1.5
CHMP4CQ96CF2 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms