Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 CDY11P-201ENST00000447168 1651 ntBASIC3.76□□□□□ -1.81
SHROOM3Q8TF72 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.76□□□□□ -1.81
SHROOM3Q8TF72 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.76□□□□□ -1.81
SHROOM3Q8TF72 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SHROOM3Q8TF72 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SHROOM3Q8TF72 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.76□□□□□ -1.81
SHROOM3Q8TF72 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.76□□□□□ -1.81
SHROOM3Q8TF72 AC104619.4-201ENST00000510773 249 ntBASIC3.76□□□□□ -1.81
SHROOM3Q8TF72 FTH1P9-201ENST00000513251 355 ntBASIC3.76□□□□□ -1.81
SHROOM3Q8TF72 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.76□□□□□ -1.81
SHROOM3Q8TF72 MIR4513-201ENST00000581077 86 ntBASIC3.76□□□□□ -1.81
SHROOM3Q8TF72 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.76□□□□□ -1.81
SHROOM3Q8TF72 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SHROOM3Q8TF72 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.76□□□□□ -1.81
SHROOM3Q8TF72 AC244258.1-201ENST00000637553 1071 ntBASIC3.76□□□□□ -1.81
SHROOM3Q8TF72 AC119674.1-207ENST00000641355 633 ntBASIC3.76□□□□□ -1.81
SHROOM3Q8TF72 MTCO1P12-201ENST00000414273 1543 ntBASIC3.76□□□□□ -1.81
SHROOM3Q8TF72 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.75□□□□□ -1.81
SHROOM3Q8TF72 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.75□□□□□ -1.81
SHROOM3Q8TF72 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.75□□□□□ -1.81
SHROOM3Q8TF72 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
SHROOM3Q8TF72 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.75□□□□□ -1.81
SHROOM3Q8TF72 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SHROOM3Q8TF72 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.75□□□□□ -1.81
SHROOM3Q8TF72 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.75□□□□□ -1.81
SHROOM3Q8TF72 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SHROOM3Q8TF72 GCNT6-201ENST00000379591 934 ntBASIC3.75□□□□□ -1.81
SHROOM3Q8TF72 RNVU1-14-201ENST00000384770 164 ntBASIC3.75□□□□□ -1.81
SHROOM3Q8TF72 U3.26-201ENST00000391236 204 ntBASIC3.75□□□□□ -1.81
SHROOM3Q8TF72 U3.39-201ENST00000408569 239 ntBASIC3.75□□□□□ -1.81
SHROOM3Q8TF72 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.75□□□□□ -1.81
SHROOM3Q8TF72 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.75□□□□□ -1.81
SHROOM3Q8TF72 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.75□□□□□ -1.81
SHROOM3Q8TF72 CCDC75P1-201ENST00000469247 791 ntBASIC3.75□□□□□ -1.81
SHROOM3Q8TF72 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.75□□□□□ -1.81
SHROOM3Q8TF72 RN7SKP209-201ENST00000516888 304 ntBASIC3.75□□□□□ -1.81
SHROOM3Q8TF72 HSPE1P5-201ENST00000561489 272 ntBASIC3.75□□□□□ -1.81
SHROOM3Q8TF72 AC010680.3-201ENST00000604215 520 ntBASIC3.75□□□□□ -1.81
SHROOM3Q8TF72 AC011816.2-201ENST00000607089 556 ntBASIC3.75□□□□□ -1.81
SHROOM3Q8TF72 AL355365.1-201ENST00000616480 294 ntBASIC3.75□□□□□ -1.81
SHROOM3Q8TF72 MIR8057-201ENST00000620957 69 ntBASIC3.75□□□□□ -1.81
SHROOM3Q8TF72 U4.6-201ENST00000621618 127 ntBASIC3.75□□□□□ -1.81
SHROOM3Q8TF72 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC3.75□□□□□ -1.81
SHROOM3Q8TF72 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.75□□□□□ -1.81
SHROOM3Q8TF72 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
SHROOM3Q8TF72 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SHROOM3Q8TF72 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SHROOM3Q8TF72 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
SHROOM3Q8TF72 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SHROOM3Q8TF72 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
SHROOM3Q8TF72 AP004289.2-201ENST00000444413 1457 ntBASIC3.74□□□□□ -1.81
SHROOM3Q8TF72 BMS1P3-201ENST00000372011 932 ntBASIC3.74□□□□□ -1.81
SHROOM3Q8TF72 OR4K6P-201ENST00000416478 897 ntBASIC3.74□□□□□ -1.81
SHROOM3Q8TF72 OR5AW1P-201ENST00000426334 1006 ntBASIC3.74□□□□□ -1.81
SHROOM3Q8TF72 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.74□□□□□ -1.81
SHROOM3Q8TF72 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.74□□□□□ -1.81
SHROOM3Q8TF72 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC3.74□□□□□ -1.81
SHROOM3Q8TF72 DUX4L52-201ENST00000549363 777 ntBASIC3.74□□□□□ -1.81
SHROOM3Q8TF72 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.74□□□□□ -1.81
SHROOM3Q8TF72 AC005344.1-201ENST00000613391 459 ntBASIC3.74□□□□□ -1.81
SHROOM3Q8TF72 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.74□□□□□ -1.81
SHROOM3Q8TF72 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.74□□□□□ -1.81
SHROOM3Q8TF72 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.74□□□□□ -1.81
SHROOM3Q8TF72 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SHROOM3Q8TF72 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
SHROOM3Q8TF72 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SHROOM3Q8TF72 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
SHROOM3Q8TF72 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
SHROOM3Q8TF72 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SHROOM3Q8TF72 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
SHROOM3Q8TF72 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SHROOM3Q8TF72 CBX1P3-201ENST00000413296 527 ntBASIC3.74□□□□□ -1.81
SHROOM3Q8TF72 MOB1AP1-201ENST00000430903 535 ntBASIC3.74□□□□□ -1.81
SHROOM3Q8TF72 RPS27AP1-201ENST00000475545 471 ntBASIC3.74□□□□□ -1.81
SHROOM3Q8TF72 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC3.74□□□□□ -1.81
SHROOM3Q8TF72 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.74□□□□□ -1.81
SHROOM3Q8TF72 AC113430.1-201ENST00000506872 718 ntBASIC3.74□□□□□ -1.81
SHROOM3Q8TF72 RNU6ATAC39P-201ENST00000516309 149 ntBASIC3.74□□□□□ -1.81
SHROOM3Q8TF72 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.74□□□□□ -1.81
SHROOM3Q8TF72 AC099489.2-201ENST00000574976 260 ntBASIC3.74□□□□□ -1.81
SHROOM3Q8TF72 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.74□□□□□ -1.81
SHROOM3Q8TF72 SNORA62.6-201ENST00000606322 83 ntBASIC3.74□□□□□ -1.81
SHROOM3Q8TF72 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC3.74□□□□□ -1.81
SHROOM3Q8TF72 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SHROOM3Q8TF72 LINC02471-203ENST00000641941 4752 ntBASIC3.74□□□□□ -1.81
SHROOM3Q8TF72 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
SHROOM3Q8TF72 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SHROOM3Q8TF72 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SHROOM3Q8TF72 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SHROOM3Q8TF72 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.73□□□□□ -1.81
SHROOM3Q8TF72 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
SHROOM3Q8TF72 AC007066.1-201ENST00000392902 381 ntBASIC3.73□□□□□ -1.81
SHROOM3Q8TF72 RPL7P60-201ENST00000397636 735 ntBASIC3.73□□□□□ -1.81
SHROOM3Q8TF72 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.73□□□□□ -1.81
SHROOM3Q8TF72 DBIP2-201ENST00000419076 262 ntBASIC3.73□□□□□ -1.81
SHROOM3Q8TF72 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC3.73□□□□□ -1.81
SHROOM3Q8TF72 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.73□□□□□ -1.81
SHROOM3Q8TF72 MTND2P25-201ENST00000449028 610 ntBASIC3.73□□□□□ -1.81
SHROOM3Q8TF72 AC010655.1-201ENST00000449336 292 ntBASIC3.73□□□□□ -1.81
SHROOM3Q8TF72 UBE2CP3-201ENST00000502715 450 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms