Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 NOL8P1-201ENST00000508336 3529 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 SNORA5A-201ENST00000384111 134 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 U3.26-201ENST00000391236 204 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AL512430.2-201ENST00000406786 339 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 RPL23AP46-201ENST00000438548 490 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AC073587.1-201ENST00000447093 876 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AC002553.2-201ENST00000453217 340 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AC120057.2-201ENST00000571520 271 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 MKKS-203ENST00000609375 882 ntTSL 2 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AC005344.1-201ENST00000613391 459 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 GLS-204ENST00000409428 816 ntTSL 2 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 PTP4A1P3-201ENST00000433661 420 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 VN1R25P-201ENST00000443385 738 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 RPL5P30-201ENST00000465511 891 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AC020893.1-201ENST00000502452 580 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 RNA5SP179-201ENST00000517284 121 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AF001550.2-201ENST00000636643 217 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 RNU1-108P-201ENST00000362556 161 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 SNORA80A-201ENST00000363922 136 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 RNVU1-14-201ENST00000384770 164 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 RNA5SP296-201ENST00000410523 111 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 RPL21P110-201ENST00000433345 446 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 RN7SL271P-201ENST00000487601 295 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AC026784.1-201ENST00000507986 352 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 EIF4BP1-201ENST00000554881 351 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 ABBA01000935.2-201ENST00000637477 838 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AC107021.2-201ENST00000567714 2095 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 MIR1251-201ENST00000408552 70 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 ATP5A1P2-201ENST00000412323 255 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AC073136.2-201ENST00000417282 849 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 HCG17-214ENST00000453558 732 ntTSL 5 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AC004924.1-201ENST00000480160 781 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 RPS6P4-201ENST00000494693 758 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AC006499.5-201ENST00000505037 514 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AC087369.1-201ENST00000520775 996 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AC010680.3-201ENST00000604215 520 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 RNU4-35P-201ENST00000362588 141 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 BX510359.1-201ENST00000456973 237 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 AC139783.2-201ENST00000504847 1145 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 AL008729.2-201ENST00000606393 473 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 MIR7112-201ENST00000616126 65 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 AL133412.1-201ENST00000380194 2992 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 AC058791.1-201ENST00000608412 3198 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 RNA5SP267-201ENST00000364893 126 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 CRP-203ENST00000368111 512 ntTSL 3 BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 SNORA68.2-201ENST00000391263 128 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 AC073063.1-201ENST00000434352 607 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 AL831737.1-201ENST00000441288 271 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms