Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 AC114774.1-201ENST00000507410 1770 ntBASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 MAPK10-328ENST00000641553 4009 ntBASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 NFIB-202ENST00000380924 840 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 Y_RNA.453-201ENST00000384223 109 ntBASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 RNU6-225P-201ENST00000384613 103 ntBASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 RNU6-114P-201ENST00000384704 105 ntBASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 AC005042.1-201ENST00000393397 800 ntBASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 PEX12P1-201ENST00000400284 1048 ntBASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 AC009804.1-201ENST00000400949 179 ntBASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 CIR1P3-201ENST00000405137 479 ntBASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 AC009237.5-201ENST00000414271 501 ntBASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 MTATP6P27-201ENST00000416987 621 ntBASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 AC048351.1-201ENST00000420064 602 ntBASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 MTCYBP24-201ENST00000420387 1106 ntBASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 NPM1P34-201ENST00000428821 893 ntBASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 CFL1P1-202ENST00000432948 411 ntBASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 CYCSP6-201ENST00000434498 302 ntBASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 LSM1P1-201ENST00000438629 273 ntBASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 AL590365.1-201ENST00000450788 243 ntBASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 HMGB1P4-201ENST00000455362 567 ntBASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 AC097493.1-201ENST00000463958 372 ntBASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 AC117522.1-201ENST00000509821 380 ntBASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 AC010342.1-201ENST00000514047 877 ntBASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 RNU6-507P-201ENST00000516045 100 ntBASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 Y_RNA.702-201ENST00000516843 96 ntBASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 AC137627.1-201ENST00000545761 289 ntBASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 AC090022.1-201ENST00000546569 311 ntBASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 AC019322.1-201ENST00000571869 389 ntBASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 SUMO2P15-201ENST00000604285 278 ntBASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 AC243773.3-201ENST00000613270 256 ntBASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 AC063943.3-201ENST00000615562 356 ntBASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM48Q8IWZ4 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
TRIM48Q8IWZ4 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
TRIM48Q8IWZ4 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
TRIM48Q8IWZ4 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
TRIM48Q8IWZ4 BX284613.1-201ENST00000452221 1641 ntBASIC5.4□□□□□ -1.55
TRIM48Q8IWZ4 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TRIM48Q8IWZ4 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.55
TRIM48Q8IWZ4 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.4□□□□□ -1.55
TRIM48Q8IWZ4 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
TRIM48Q8IWZ4 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM48Q8IWZ4 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM48Q8IWZ4 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM48Q8IWZ4 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM48Q8IWZ4 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.39□□□□□ -1.55
TRIM48Q8IWZ4 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM48Q8IWZ4 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM48Q8IWZ4 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.39□□□□□ -1.55
TRIM48Q8IWZ4 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
TRIM48Q8IWZ4 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM48Q8IWZ4 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM48Q8IWZ4 AC137056.2-201ENST00000624055 1958 ntBASIC5.39□□□□□ -1.55
TRIM48Q8IWZ4 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM48Q8IWZ4 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms