Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 RNU6-276P-201ENST00000516114 96 ntBASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 RNU6-1028P-201ENST00000517164 93 ntBASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 SOD1P3-201ENST00000518682 454 ntBASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 AC104417.1-201ENST00000523974 751 ntBASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 OR4R3P-201ENST00000525084 838 ntBASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 MTCO1P40-201ENST00000574371 625 ntBASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 RPL7P50-201ENST00000600588 727 ntBASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 Z82195.1-201ENST00000604558 398 ntBASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 AC078899.5-201ENST00000612475 178 ntBASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 AC004232.3-201ENST00000622977 525 ntBASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 AP003485.1-201ENST00000625093 753 ntBASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 OR4G3P-201ENST00000633500 913 ntBASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 AC092435.4-201ENST00000623012 4159 ntBASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 AC107081.3-201ENST00000612715 2034 ntBASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 AL391684.1-202ENST00000641293 1636 ntBASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 AC108751.5-201ENST00000492880 1336 ntBASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 AC126323.6-202ENST00000568092 3511 ntBASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 MFSD8-242ENST00000641690 4199 ntBASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 OR4K15-201ENST00000305051 1216 ntBASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 SNORD113.2-201ENST00000364166 89 ntBASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 MIR3074-201ENST00000384885 81 ntBASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 AL049697.2-201ENST00000403708 294 ntBASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 AL513175.1-201ENST00000431492 780 ntBASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 RPL21P110-201ENST00000433345 446 ntBASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 HMGB1P45-201ENST00000435986 653 ntBASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 AL138878.2-201ENST00000440581 1241 ntBASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 AC004865.1-201ENST00000442276 1003 ntBASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 MTND1P33-201ENST00000446251 917 ntBASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 SCARNA10-201ENST00000459255 330 ntBASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 RPL6P9-201ENST00000466502 859 ntBASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 AC104164.3-201ENST00000467363 1258 ntBASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 RPL12P20-201ENST00000475538 479 ntBASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 AC078817.1-201ENST00000492623 435 ntBASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 AC092045.1-201ENST00000495716 1231 ntBASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 HPRT1P1-201ENST00000509498 657 ntBASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 RNU6-488P-201ENST00000515918 99 ntBASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 IGHV3-32-201ENST00000519182 355 ntBASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 IGJP1-201ENST00000522682 475 ntBASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 AC021451.1-201ENST00000523498 1129 ntBASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 AC087897.1-201ENST00000550134 156 ntBASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 RPL21P7-201ENST00000557463 483 ntBASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 AC015912.2-201ENST00000571053 181 ntBASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 AC017100.2-201ENST00000584628 355 ntBASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 AC068790.7-201ENST00000602347 528 ntBASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 AC073091.2-201ENST00000603205 907 ntBASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 AL133338.2-201ENST00000604292 736 ntBASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 AC073387.2-201ENST00000604797 784 ntBASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 AL109659.3-201ENST00000624985 950 ntBASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 EOGT-210ENST00000615922 1931 ntBASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 AC105074.1-201ENST00000623380 3095 ntBASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 AC087190.4-201ENST00000574616 8334 ntBASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
NUP54Q7Z3B4 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms