Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
C11orf88Q6PI97 RPS7P2-201ENST00000435134 607 ntBASIC4.13□□□□□ -1.75
C11orf88Q6PI97 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.13□□□□□ -1.75
C11orf88Q6PI97 AC069285.2-201ENST00000440210 275 ntBASIC4.13□□□□□ -1.75
C11orf88Q6PI97 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
C11orf88Q6PI97 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.13□□□□□ -1.75
C11orf88Q6PI97 AL136126.1-201ENST00000473603 402 ntBASIC4.13□□□□□ -1.75
C11orf88Q6PI97 SYPL1P1-201ENST00000473622 768 ntBASIC4.13□□□□□ -1.75
C11orf88Q6PI97 RN7SL817P-201ENST00000480777 288 ntBASIC4.13□□□□□ -1.75
C11orf88Q6PI97 AC078918.1-201ENST00000498515 228 ntBASIC4.13□□□□□ -1.75
C11orf88Q6PI97 AC146944.2-203ENST00000502493 354 ntBASIC4.13□□□□□ -1.75
C11orf88Q6PI97 AC139495.1-202ENST00000513164 354 ntBASIC4.13□□□□□ -1.75
C11orf88Q6PI97 AC004980.4-201ENST00000513375 203 ntBASIC4.13□□□□□ -1.75
C11orf88Q6PI97 RNU6-885P-201ENST00000516607 104 ntBASIC4.13□□□□□ -1.75
C11orf88Q6PI97 snoZ278.1-201ENST00000517059 112 ntBASIC4.13□□□□□ -1.75
C11orf88Q6PI97 MYL12AP1-201ENST00000518490 515 ntBASIC4.13□□□□□ -1.75
C11orf88Q6PI97 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.13□□□□□ -1.75
C11orf88Q6PI97 AC008802.1-201ENST00000519121 791 ntBASIC4.13□□□□□ -1.75
C11orf88Q6PI97 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.13□□□□□ -1.75
C11orf88Q6PI97 AP003066.2-201ENST00000529375 555 ntBASIC4.13□□□□□ -1.75
C11orf88Q6PI97 OR11J2P-201ENST00000555298 907 ntBASIC4.13□□□□□ -1.75
C11orf88Q6PI97 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
C11orf88Q6PI97 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.13□□□□□ -1.75
C11orf88Q6PI97 MIR3934-201ENST00000579806 107 ntBASIC4.13□□□□□ -1.75
C11orf88Q6PI97 AC005412.1-201ENST00000580812 1049 ntBASIC4.13□□□□□ -1.75
C11orf88Q6PI97 AC008507.2-201ENST00000588402 1176 ntBASIC4.13□□□□□ -1.75
C11orf88Q6PI97 VN1R87P-201ENST00000596706 487 ntBASIC4.13□□□□□ -1.75
C11orf88Q6PI97 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.13□□□□□ -1.75
C11orf88Q6PI97 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.13□□□□□ -1.75
C11orf88Q6PI97 AC068620.3-201ENST00000602749 560 ntBASIC4.13□□□□□ -1.75
C11orf88Q6PI97 AC024940.4-201ENST00000605507 246 ntBASIC4.13□□□□□ -1.75
C11orf88Q6PI97 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.13□□□□□ -1.75
C11orf88Q6PI97 AC133644.2-201ENST00000608142 540 ntBASIC4.13□□□□□ -1.75
C11orf88Q6PI97 Mico1.1-201ENST00000611698 204 ntBASIC4.13□□□□□ -1.75
C11orf88Q6PI97 AL354976.1-201ENST00000613843 387 ntBASIC4.13□□□□□ -1.75
C11orf88Q6PI97 AL049794.2-201ENST00000616301 365 ntBASIC4.13□□□□□ -1.75
C11orf88Q6PI97 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.13□□□□□ -1.75
C11orf88Q6PI97 AC019206.1-201ENST00000621938 425 ntBASIC4.13□□□□□ -1.75
C11orf88Q6PI97 AP003476.1-201ENST00000623984 516 ntBASIC4.13□□□□□ -1.75
C11orf88Q6PI97 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.13□□□□□ -1.75
C11orf88Q6PI97 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.13□□□□□ -1.75
C11orf88Q6PI97 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.13□□□□□ -1.75
C11orf88Q6PI97 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
C11orf88Q6PI97 GABPAP-201ENST00000419271 1356 ntBASIC4.13□□□□□ -1.75
C11orf88Q6PI97 ZNF37BP-203ENST00000452306 1352 ntBASIC4.13□□□□□ -1.75
C11orf88Q6PI97 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
C11orf88Q6PI97 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
C11orf88Q6PI97 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
C11orf88Q6PI97 DHX40P1-201ENST00000588725 1412 ntBASIC4.12□□□□□ -1.75
C11orf88Q6PI97 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
C11orf88Q6PI97 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
C11orf88Q6PI97 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.12□□□□□ -1.75
C11orf88Q6PI97 AC066616.2-201ENST00000559334 1481 ntBASIC4.12□□□□□ -1.75
C11orf88Q6PI97 AC011266.1-201ENST00000624119 3569 ntBASIC4.12□□□□□ -1.75
C11orf88Q6PI97 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
C11orf88Q6PI97 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.12□□□□□ -1.75
C11orf88Q6PI97 AC106871.1-201ENST00000568324 3102 ntBASIC4.12□□□□□ -1.75
C11orf88Q6PI97 SNURFL-201ENST00000309296 343 ntBASIC4.12□□□□□ -1.75
C11orf88Q6PI97 RNU6-582P-201ENST00000362989 107 ntBASIC4.12□□□□□ -1.75
C11orf88Q6PI97 RNA5SP189-201ENST00000364920 115 ntBASIC4.12□□□□□ -1.75
C11orf88Q6PI97 RNU6-619P-201ENST00000365146 108 ntBASIC4.12□□□□□ -1.75
C11orf88Q6PI97 AL109941.1-201ENST00000401925 229 ntBASIC4.12□□□□□ -1.75
C11orf88Q6PI97 AL121978.1-201ENST00000402778 359 ntBASIC4.12□□□□□ -1.75
C11orf88Q6PI97 U3.35-201ENST00000408405 208 ntBASIC4.12□□□□□ -1.75
C11orf88Q6PI97 RNU6-575P-201ENST00000411326 105 ntBASIC4.12□□□□□ -1.75
C11orf88Q6PI97 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.12□□□□□ -1.75
C11orf88Q6PI97 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.12□□□□□ -1.75
C11orf88Q6PI97 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
C11orf88Q6PI97 EIF4EP1-201ENST00000422311 642 ntBASIC4.12□□□□□ -1.75
C11orf88Q6PI97 RPS6P14-201ENST00000425165 719 ntBASIC4.12□□□□□ -1.75
C11orf88Q6PI97 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.12□□□□□ -1.75
C11orf88Q6PI97 RBMY2QP-201ENST00000429799 1147 ntBASIC4.12□□□□□ -1.75
C11orf88Q6PI97 B3GNT2P1-201ENST00000434960 952 ntBASIC4.12□□□□□ -1.75
C11orf88Q6PI97 AL645931.1-201ENST00000439737 410 ntBASIC4.12□□□□□ -1.75
C11orf88Q6PI97 AL450023.3-201ENST00000440592 271 ntBASIC4.12□□□□□ -1.75
C11orf88Q6PI97 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.12□□□□□ -1.75
C11orf88Q6PI97 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
C11orf88Q6PI97 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.12□□□□□ -1.75
C11orf88Q6PI97 RPS29P22-201ENST00000472363 168 ntBASIC4.12□□□□□ -1.75
C11orf88Q6PI97 AC010301.1-201ENST00000473936 355 ntBASIC4.12□□□□□ -1.75
C11orf88Q6PI97 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.12□□□□□ -1.75
C11orf88Q6PI97 AC090114.3-201ENST00000479267 829 ntBASIC4.12□□□□□ -1.75
C11orf88Q6PI97 RN7SL244P-201ENST00000493405 297 ntBASIC4.12□□□□□ -1.75
C11orf88Q6PI97 AC104629.1-201ENST00000494226 508 ntBASIC4.12□□□□□ -1.75
C11orf88Q6PI97 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.12□□□□□ -1.75
C11orf88Q6PI97 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
C11orf88Q6PI97 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
C11orf88Q6PI97 AC005921.1-201ENST00000510589 286 ntBASIC4.12□□□□□ -1.75
C11orf88Q6PI97 AC008694.2-201ENST00000517591 306 ntBASIC4.12□□□□□ -1.75
C11orf88Q6PI97 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.12□□□□□ -1.75
C11orf88Q6PI97 BRD9P1-201ENST00000529855 560 ntBASIC4.12□□□□□ -1.75
C11orf88Q6PI97 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.12□□□□□ -1.75
C11orf88Q6PI97 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.12□□□□□ -1.75
C11orf88Q6PI97 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.12□□□□□ -1.75
C11orf88Q6PI97 OR7A19P-201ENST00000608051 733 ntBASIC4.12□□□□□ -1.75
C11orf88Q6PI97 AC093799.2-201ENST00000610062 578 ntBASIC4.12□□□□□ -1.75
C11orf88Q6PI97 AL512427.1-201ENST00000618593 349 ntBASIC4.12□□□□□ -1.75
C11orf88Q6PI97 AC112694.2-201ENST00000623697 768 ntBASIC4.12□□□□□ -1.75
C11orf88Q6PI97 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.12□□□□□ -1.75
C11orf88Q6PI97 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms