Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC138393.1-206ENST00000540997 1886 ntBASIC3.44□□□□□ -1.86
RIF1Q5UIP0 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RIF1Q5UIP0 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RIF1Q5UIP0 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RIF1Q5UIP0 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
RIF1Q5UIP0 RNU6-304P-201ENST00000364855 107 ntBASIC3.44□□□□□ -1.86
RIF1Q5UIP0 MIR504-201ENST00000385065 83 ntBASIC3.44□□□□□ -1.86
RIF1Q5UIP0 AL136131.1-201ENST00000406079 803 ntBASIC3.44□□□□□ -1.86
RIF1Q5UIP0 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.44□□□□□ -1.86
RIF1Q5UIP0 HMGN1P24-201ENST00000412282 298 ntBASIC3.44□□□□□ -1.86
RIF1Q5UIP0 VDAC1P9-201ENST00000412766 841 ntBASIC3.44□□□□□ -1.86
RIF1Q5UIP0 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.44□□□□□ -1.86
RIF1Q5UIP0 TOMM20P4-201ENST00000427861 435 ntBASIC3.44□□□□□ -1.86
RIF1Q5UIP0 RNA5SP208-201ENST00000516156 78 ntBASIC3.44□□□□□ -1.86
RIF1Q5UIP0 RNU1-41P-201ENST00000516161 162 ntBASIC3.44□□□□□ -1.86
RIF1Q5UIP0 RNU1-48P-201ENST00000516400 162 ntBASIC3.44□□□□□ -1.86
RIF1Q5UIP0 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.44□□□□□ -1.86
RIF1Q5UIP0 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RIF1Q5UIP0 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
RIF1Q5UIP0 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RIF1Q5UIP0 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RIF1Q5UIP0 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
RIF1Q5UIP0 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RIF1Q5UIP0 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RIF1Q5UIP0 AL079305.1-201ENST00000623159 3008 ntBASIC3.44□□□□□ -1.86
RIF1Q5UIP0 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RIF1Q5UIP0 RNU1-140P-201ENST00000365040 165 ntBASIC3.44□□□□□ -1.86
RIF1Q5UIP0 AL031679.1-201ENST00000400616 525 ntBASIC3.44□□□□□ -1.86
RIF1Q5UIP0 OR2AH1P-201ENST00000425717 928 ntBASIC3.44□□□□□ -1.86
RIF1Q5UIP0 MRPS33P4-201ENST00000434892 317 ntBASIC3.44□□□□□ -1.86
RIF1Q5UIP0 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RIF1Q5UIP0 AC004024.1-201ENST00000549244 247 ntBASIC3.44□□□□□ -1.86
RIF1Q5UIP0 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.44□□□□□ -1.86
RIF1Q5UIP0 AC127502.3-201ENST00000636170 1206 ntBASIC3.44□□□□□ -1.86
RIF1Q5UIP0 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
RIF1Q5UIP0 DHX9P1-201ENST00000436565 3076 ntBASIC3.43□□□□□ -1.86
RIF1Q5UIP0 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
RIF1Q5UIP0 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
RIF1Q5UIP0 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RIF1Q5UIP0 AC092435.4-201ENST00000623012 4159 ntBASIC3.43□□□□□ -1.86
RIF1Q5UIP0 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.43□□□□□ -1.86
RIF1Q5UIP0 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.43□□□□□ -1.86
RIF1Q5UIP0 MTHFD2P2-201ENST00000407725 247 ntBASIC3.43□□□□□ -1.86
RIF1Q5UIP0 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC3.43□□□□□ -1.86
RIF1Q5UIP0 NPM1P48-201ENST00000436002 853 ntBASIC3.43□□□□□ -1.86
RIF1Q5UIP0 TXNP1-201ENST00000441872 371 ntBASIC3.43□□□□□ -1.86
RIF1Q5UIP0 RPL7P48-201ENST00000461513 746 ntBASIC3.43□□□□□ -1.86
RIF1Q5UIP0 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.43□□□□□ -1.86
RIF1Q5UIP0 AP001207.2-201ENST00000519490 539 ntBASIC3.43□□□□□ -1.86
RIF1Q5UIP0 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.43□□□□□ -1.86
RIF1Q5UIP0 MIR4319-201ENST00000577285 85 ntBASIC3.43□□□□□ -1.86
RIF1Q5UIP0 ELOCP29-201ENST00000588193 334 ntBASIC3.43□□□□□ -1.86
RIF1Q5UIP0 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RIF1Q5UIP0 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
RIF1Q5UIP0 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC3.43□□□□□ -1.86
RIF1Q5UIP0 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
RIF1Q5UIP0 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
RIF1Q5UIP0 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RIF1Q5UIP0 AC007685.1-201ENST00000329806 452 ntBASIC3.43□□□□□ -1.86
RIF1Q5UIP0 RNA5SP184-201ENST00000411071 108 ntBASIC3.43□□□□□ -1.86
RIF1Q5UIP0 AL353678.1-201ENST00000422735 741 ntBASIC3.43□□□□□ -1.86
RIF1Q5UIP0 ATP5HP2-201ENST00000433885 485 ntBASIC3.43□□□□□ -1.86
RIF1Q5UIP0 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC3.43□□□□□ -1.86
RIF1Q5UIP0 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.43□□□□□ -1.86
RIF1Q5UIP0 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.43□□□□□ -1.86
RIF1Q5UIP0 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.43□□□□□ -1.86
RIF1Q5UIP0 RPL21P7-201ENST00000557463 483 ntBASIC3.43□□□□□ -1.86
RIF1Q5UIP0 AL360157.1-201ENST00000565962 87 ntBASIC3.43□□□□□ -1.86
RIF1Q5UIP0 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RIF1Q5UIP0 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RIF1Q5UIP0 AL359693.1-201ENST00000614959 2407 ntBASIC3.42□□□□□ -1.86
RIF1Q5UIP0 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC3.42□□□□□ -1.86
RIF1Q5UIP0 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RIF1Q5UIP0 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.42□□□□□ -1.86
RIF1Q5UIP0 RN7SKP53-201ENST00000411337 315 ntBASIC3.42□□□□□ -1.86
RIF1Q5UIP0 AC105272.1-201ENST00000438604 198 ntBASIC3.42□□□□□ -1.86
RIF1Q5UIP0 AF228730.2-201ENST00000438784 848 ntBASIC3.42□□□□□ -1.86
RIF1Q5UIP0 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.42□□□□□ -1.86
RIF1Q5UIP0 AC008011.1-201ENST00000545989 227 ntBASIC3.42□□□□□ -1.86
RIF1Q5UIP0 AL163642.2-201ENST00000604722 1019 ntBASIC3.42□□□□□ -1.86
RIF1Q5UIP0 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC3.42□□□□□ -1.86
RIF1Q5UIP0 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.42□□□□□ -1.86
RIF1Q5UIP0 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RIF1Q5UIP0 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.42□□□□□ -1.86
RIF1Q5UIP0 AC007656.2-201ENST00000624902 4547 ntBASIC3.42□□□□□ -1.86
RIF1Q5UIP0 Z83843.1-201ENST00000604070 3685 ntBASIC3.42□□□□□ -1.86
RIF1Q5UIP0 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RIF1Q5UIP0 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC3.42□□□□□ -1.86
RIF1Q5UIP0 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RIF1Q5UIP0 NPM1P11-201ENST00000417106 855 ntBASIC3.42□□□□□ -1.86
RIF1Q5UIP0 AC099063.2-201ENST00000446360 662 ntBASIC3.42□□□□□ -1.86
RIF1Q5UIP0 FDX1P2-201ENST00000450769 375 ntBASIC3.42□□□□□ -1.86
RIF1Q5UIP0 RN7SL863P-201ENST00000462370 296 ntBASIC3.42□□□□□ -1.86
RIF1Q5UIP0 UBL5P3-201ENST00000475112 231 ntBASIC3.42□□□□□ -1.86
RIF1Q5UIP0 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.42□□□□□ -1.86
RIF1Q5UIP0 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC3.42□□□□□ -1.86
RIF1Q5UIP0 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.42□□□□□ -1.86
RIF1Q5UIP0 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC3.42□□□□□ -1.86
RIF1Q5UIP0 AC093849.1-201ENST00000563631 2209 ntBASIC3.42□□□□□ -1.86
RIF1Q5UIP0 AC027216.1-201ENST00000577726 685 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms