Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 ELOCP15-201ENST00000442090 332 ntBASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 AL671855.1-201ENST00000446875 1203 ntBASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 AC124312.4-201ENST00000605533 310 ntBASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 HMGN1P24-201ENST00000412282 298 ntBASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 REREP1Y-201ENST00000422655 198 ntBASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 REREP2Y-201ENST00000439103 200 ntBASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 RNU1-41P-201ENST00000516161 162 ntBASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 RNU1-48P-201ENST00000516400 162 ntBASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 AC006363.1-201ENST00000603806 463 ntBASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 AC097504.1-201ENST00000515103 2415 ntBASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 RN7SKP111-201ENST00000410349 271 ntBASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 IGKV1OR9-2-201ENST00000431378 277 ntBASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 RPS20P1-201ENST00000434853 354 ntBASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 AC000041.1-201ENST00000439655 175 ntBASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 HMGB1P5-202ENST00000451497 985 ntBASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 MRPL35P4-201ENST00000453682 566 ntBASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 KC877982.1-201ENST00000602313 470 ntBASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 MRPS35P3-201ENST00000603189 709 ntBASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 LSM1P2-201ENST00000604911 322 ntBASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 ZNF807-201ENST00000328088 1707 ntBASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 MFSD8-233ENST00000641482 4860 ntBASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 RHOT1P2-201ENST00000366423 333 ntBASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 AC069306.1-201ENST00000507006 843 ntBASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 AC109458.1-201ENST00000508858 316 ntBASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 TBCA-206ENST00000518338 551 ntTSL 2 BASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 AL049844.2-201ENST00000604280 628 ntBASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 AL354760.1-201ENST00000608357 643 ntBASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 AC006504.1-201ENST00000562493 3666 ntBASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 OR5J1P-201ENST00000313544 939 ntBASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 RNA5SP42-201ENST00000364278 115 ntBASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 HIGD1AP12-201ENST00000427832 281 ntBASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 VN1R104P-201ENST00000505115 1009 ntBASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 AP005262.1-201ENST00000582646 997 ntBASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 BRDTP1-201ENST00000605735 677 ntBASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 CRP-203ENST00000368111 512 ntTSL 3 BASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 RSL24D1P1-201ENST00000404972 493 ntBASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 RPL32P34-201ENST00000486380 400 ntBASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 AC026784.1-201ENST00000507986 352 ntBASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 AL450472.3-201ENST00000615578 367 ntBASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 DDX6P1-205ENST00000441966 1436 ntBASIC2.31□□□□□ -2.04
VPS13DQ5THJ4 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 RPSAP41-201ENST00000439695 860 ntBASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 AC097262.1-201ENST00000452559 548 ntBASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms