Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AC105272.1-201ENST00000438604 198 ntBASIC3.11□□□□□ -1.91
LRRK2Q5S007 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.11□□□□□ -1.91
LRRK2Q5S007 RPL7P36-201ENST00000444633 681 ntBASIC3.11□□□□□ -1.91
LRRK2Q5S007 AL445433.1-201ENST00000457507 257 ntBASIC3.11□□□□□ -1.91
LRRK2Q5S007 S100A11P1-201ENST00000477525 312 ntBASIC3.11□□□□□ -1.91
LRRK2Q5S007 RN7SKP31-201ENST00000516354 278 ntBASIC3.11□□□□□ -1.91
LRRK2Q5S007 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.11□□□□□ -1.91
LRRK2Q5S007 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC3.11□□□□□ -1.91
LRRK2Q5S007 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC3.11□□□□□ -1.91
LRRK2Q5S007 AC107993.1-201ENST00000591343 684 ntBASIC3.11□□□□□ -1.91
LRRK2Q5S007 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC3.11□□□□□ -1.91
LRRK2Q5S007 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.11□□□□□ -1.91
LRRK2Q5S007 Xist_exon4.1-201ENST00000615964 126 ntBASIC3.11□□□□□ -1.91
LRRK2Q5S007 BCLAF1P2-201ENST00000624956 2609 ntBASIC3.11□□□□□ -1.91
LRRK2Q5S007 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.11□□□□□ -1.91
LRRK2Q5S007 AL022393.1-201ENST00000625142 1677 ntBASIC3.11□□□□□ -1.91
LRRK2Q5S007 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
LRRK2Q5S007 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
LRRK2Q5S007 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.11□□□□□ -1.91
LRRK2Q5S007 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LRRK2Q5S007 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
LRRK2Q5S007 RNA5SP235-201ENST00000365411 114 ntBASIC3.11□□□□□ -1.91
LRRK2Q5S007 AC091862.1-201ENST00000438016 1100 ntBASIC3.11□□□□□ -1.91
LRRK2Q5S007 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC3.11□□□□□ -1.91
LRRK2Q5S007 AC009963.4-201ENST00000448535 339 ntBASIC3.11□□□□□ -1.91
LRRK2Q5S007 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LRRK2Q5S007 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.11□□□□□ -1.91
LRRK2Q5S007 DPPA3P2-201ENST00000553589 478 ntBASIC3.11□□□□□ -1.91
LRRK2Q5S007 AC087241.4-201ENST00000612441 480 ntBASIC3.11□□□□□ -1.91
LRRK2Q5S007 AP003355.3-201ENST00000623465 114 ntBASIC3.11□□□□□ -1.91
LRRK2Q5S007 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC3.1□□□□□ -1.91
LRRK2Q5S007 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
LRRK2Q5S007 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
LRRK2Q5S007 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
LRRK2Q5S007 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LRRK2Q5S007 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.1□□□□□ -1.91
LRRK2Q5S007 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LRRK2Q5S007 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.1□□□□□ -1.91
LRRK2Q5S007 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LRRK2Q5S007 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LRRK2Q5S007 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC3.1□□□□□ -1.91
LRRK2Q5S007 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LRRK2Q5S007 RNA5SP197-201ENST00000363357 119 ntBASIC3.1□□□□□ -1.91
LRRK2Q5S007 MIR504-201ENST00000385065 83 ntBASIC3.1□□□□□ -1.91
LRRK2Q5S007 AC245054.1-201ENST00000420944 258 ntBASIC3.1□□□□□ -1.91
LRRK2Q5S007 NPM1P48-201ENST00000436002 853 ntBASIC3.1□□□□□ -1.91
LRRK2Q5S007 AC099063.2-201ENST00000446360 662 ntBASIC3.1□□□□□ -1.91
LRRK2Q5S007 UBL5P3-201ENST00000475112 231 ntBASIC3.1□□□□□ -1.91
LRRK2Q5S007 NRBF2P5-201ENST00000603087 788 ntBASIC3.1□□□□□ -1.91
LRRK2Q5S007 AL034351.1-201ENST00000605288 668 ntBASIC3.1□□□□□ -1.91
LRRK2Q5S007 AC026422.1-201ENST00000623961 452 ntBASIC3.1□□□□□ -1.91
LRRK2Q5S007 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.1□□□□□ -1.91
LRRK2Q5S007 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LRRK2Q5S007 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LRRK2Q5S007 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LRRK2Q5S007 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LRRK2Q5S007 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
LRRK2Q5S007 RNU1-140P-201ENST00000365040 165 ntBASIC3.1□□□□□ -1.91
LRRK2Q5S007 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LRRK2Q5S007 SNORA7.4-201ENST00000384249 137 ntBASIC3.1□□□□□ -1.91
LRRK2Q5S007 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.1□□□□□ -1.91
LRRK2Q5S007 NUP35P1-201ENST00000422734 947 ntBASIC3.1□□□□□ -1.91
LRRK2Q5S007 AC073508.1-201ENST00000428866 656 ntBASIC3.1□□□□□ -1.91
LRRK2Q5S007 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.1□□□□□ -1.91
LRRK2Q5S007 RPS4XP18-201ENST00000495480 763 ntBASIC3.1□□□□□ -1.91
LRRK2Q5S007 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.1□□□□□ -1.91
LRRK2Q5S007 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.1□□□□□ -1.91
LRRK2Q5S007 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LRRK2Q5S007 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.1□□□□□ -1.91
LRRK2Q5S007 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.1□□□□□ -1.91
LRRK2Q5S007 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
LRRK2Q5S007 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
LRRK2Q5S007 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LRRK2Q5S007 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LRRK2Q5S007 HSPA8P19-201ENST00000505359 1517 ntBASIC3.09□□□□□ -1.91
LRRK2Q5S007 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LRRK2Q5S007 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.09□□□□□ -1.91
LRRK2Q5S007 AP000542.2-201ENST00000623199 6179 ntBASIC3.09□□□□□ -1.91
LRRK2Q5S007 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LRRK2Q5S007 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC3.09□□□□□ -1.91
LRRK2Q5S007 DHX9P1-201ENST00000436565 3076 ntBASIC3.09□□□□□ -1.91
LRRK2Q5S007 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
LRRK2Q5S007 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.09□□□□□ -1.91
LRRK2Q5S007 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LRRK2Q5S007 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC3.09□□□□□ -1.91
LRRK2Q5S007 AC005189.1-201ENST00000431286 310 ntBASIC3.09□□□□□ -1.91
LRRK2Q5S007 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.09□□□□□ -1.91
LRRK2Q5S007 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LRRK2Q5S007 AC140076.1-201ENST00000449897 361 ntBASIC3.09□□□□□ -1.91
LRRK2Q5S007 AC090151.1-201ENST00000520784 730 ntBASIC3.09□□□□□ -1.91
LRRK2Q5S007 AL354976.1-201ENST00000613843 387 ntBASIC3.09□□□□□ -1.91
LRRK2Q5S007 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC3.09□□□□□ -1.91
LRRK2Q5S007 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LRRK2Q5S007 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.09□□□□□ -1.92
LRRK2Q5S007 TNPO1P3-201ENST00000436471 2662 ntBASIC3.09□□□□□ -1.92
LRRK2Q5S007 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
LRRK2Q5S007 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC3.09□□□□□ -1.92
LRRK2Q5S007 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
LRRK2Q5S007 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
LRRK2Q5S007 AC107083.1-201ENST00000439643 279 ntBASIC3.09□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms