Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.49□□□□□ -1.53
LONRF3Q496Y0 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.49□□□□□ -1.53
LONRF3Q496Y0 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.49□□□□□ -1.53
LONRF3Q496Y0 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LONRF3Q496Y0 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.49□□□□□ -1.53
LONRF3Q496Y0 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.49□□□□□ -1.53
LONRF3Q496Y0 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.49□□□□□ -1.53
LONRF3Q496Y0 AC044913.1-201ENST00000557200 430 ntBASIC5.49□□□□□ -1.53
LONRF3Q496Y0 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.49□□□□□ -1.53
LONRF3Q496Y0 AC104785.1-201ENST00000603220 588 ntBASIC5.49□□□□□ -1.53
LONRF3Q496Y0 AC005191.1-201ENST00000603950 358 ntBASIC5.49□□□□□ -1.53
LONRF3Q496Y0 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.49□□□□□ -1.53
LONRF3Q496Y0 AC022106.2-201ENST00000620114 757 ntBASIC5.49□□□□□ -1.53
LONRF3Q496Y0 AC004943.3-201ENST00000624116 600 ntBASIC5.49□□□□□ -1.53
LONRF3Q496Y0 AC068137.4-201ENST00000638485 296 ntBASIC5.49□□□□□ -1.53
LONRF3Q496Y0 AL672167.1-203ENST00000641299 2975 ntBASIC5.49□□□□□ -1.53
LONRF3Q496Y0 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
LONRF3Q496Y0 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LONRF3Q496Y0 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.49□□□□□ -1.53
LONRF3Q496Y0 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
LONRF3Q496Y0 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.48□□□□□ -1.53
LONRF3Q496Y0 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.48□□□□□ -1.53
LONRF3Q496Y0 AC126323.6-202ENST00000568092 3511 ntBASIC5.48□□□□□ -1.53
LONRF3Q496Y0 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LONRF3Q496Y0 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LONRF3Q496Y0 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.48□□□□□ -1.53
LONRF3Q496Y0 SAMMSON-226ENST00000642089 1582 ntBASIC5.48□□□□□ -1.53
LONRF3Q496Y0 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LONRF3Q496Y0 Y_RNA.169-201ENST00000363745 96 ntBASIC5.48□□□□□ -1.53
LONRF3Q496Y0 MIR1271-201ENST00000408537 86 ntBASIC5.48□□□□□ -1.53
LONRF3Q496Y0 AC009518.2-201ENST00000418056 731 ntBASIC5.48□□□□□ -1.53
LONRF3Q496Y0 RPL31P45-201ENST00000419532 356 ntBASIC5.48□□□□□ -1.53
LONRF3Q496Y0 E2F6P2-201ENST00000420708 748 ntBASIC5.48□□□□□ -1.53
LONRF3Q496Y0 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.48□□□□□ -1.53
LONRF3Q496Y0 AC004448.2-201ENST00000422360 586 ntBASIC5.48□□□□□ -1.53
LONRF3Q496Y0 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.48□□□□□ -1.53
LONRF3Q496Y0 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.48□□□□□ -1.53
LONRF3Q496Y0 MOB1AP1-201ENST00000430903 535 ntBASIC5.48□□□□□ -1.53
LONRF3Q496Y0 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.48□□□□□ -1.53
LONRF3Q496Y0 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.48□□□□□ -1.53
LONRF3Q496Y0 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.48□□□□□ -1.53
LONRF3Q496Y0 OR52J1P-201ENST00000450596 932 ntBASIC5.48□□□□□ -1.53
LONRF3Q496Y0 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.48□□□□□ -1.53
LONRF3Q496Y0 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.48□□□□□ -1.53
LONRF3Q496Y0 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.48□□□□□ -1.53
LONRF3Q496Y0 RPL23AP56-201ENST00000460778 453 ntBASIC5.48□□□□□ -1.53
LONRF3Q496Y0 AL591473.1-201ENST00000464297 313 ntBASIC5.48□□□□□ -1.53
LONRF3Q496Y0 RN7SL738P-201ENST00000470264 297 ntBASIC5.48□□□□□ -1.53
LONRF3Q496Y0 MTND2P14-201ENST00000482139 351 ntBASIC5.48□□□□□ -1.53
LONRF3Q496Y0 PRELID3BP7-201ENST00000503606 469 ntBASIC5.48□□□□□ -1.53
LONRF3Q496Y0 AC090071.1-201ENST00000507713 644 ntBASIC5.48□□□□□ -1.53
LONRF3Q496Y0 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.48□□□□□ -1.53
LONRF3Q496Y0 Y_RNA.719-201ENST00000517156 106 ntBASIC5.48□□□□□ -1.53
LONRF3Q496Y0 MTCO3P15-201ENST00000526563 574 ntBASIC5.48□□□□□ -1.53
LONRF3Q496Y0 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC5.48□□□□□ -1.53
LONRF3Q496Y0 AL049839.1-201ENST00000556151 657 ntBASIC5.48□□□□□ -1.53
LONRF3Q496Y0 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.48□□□□□ -1.53
LONRF3Q496Y0 AC090695.1-201ENST00000561269 1222 ntBASIC5.48□□□□□ -1.53
LONRF3Q496Y0 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.48□□□□□ -1.53
LONRF3Q496Y0 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC5.48□□□□□ -1.53
LONRF3Q496Y0 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.48□□□□□ -1.53
LONRF3Q496Y0 TVP23CP2-201ENST00000571473 623 ntBASIC5.48□□□□□ -1.53
LONRF3Q496Y0 MIR4504-201ENST00000577413 92 ntBASIC5.48□□□□□ -1.53
LONRF3Q496Y0 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.48□□□□□ -1.53
LONRF3Q496Y0 RN7SL52P-201ENST00000584271 284 ntBASIC5.48□□□□□ -1.53
LONRF3Q496Y0 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.48□□□□□ -1.53
LONRF3Q496Y0 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.48□□□□□ -1.53
LONRF3Q496Y0 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.48□□□□□ -1.53
LONRF3Q496Y0 RNF138P2-201ENST00000603490 592 ntBASIC5.48□□□□□ -1.53
LONRF3Q496Y0 IMMP1LP1-201ENST00000605170 488 ntBASIC5.48□□□□□ -1.53
LONRF3Q496Y0 AC010424.2-201ENST00000607594 443 ntBASIC5.48□□□□□ -1.53
LONRF3Q496Y0 AP004247.3-201ENST00000608682 624 ntBASIC5.48□□□□□ -1.53
LONRF3Q496Y0 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.48□□□□□ -1.53
LONRF3Q496Y0 AC105429.2-201ENST00000610567 517 ntBASIC5.48□□□□□ -1.53
LONRF3Q496Y0 TUSC7.1-201ENST00000610969 165 ntBASIC5.48□□□□□ -1.53
LONRF3Q496Y0 AL359535.1-201ENST00000612100 1087 ntBASIC5.48□□□□□ -1.53
LONRF3Q496Y0 MIR6798-201ENST00000612887 67 ntBASIC5.48□□□□□ -1.53
LONRF3Q496Y0 RN7SL722P-201ENST00000617780 284 ntBASIC5.48□□□□□ -1.53
LONRF3Q496Y0 RN7SL565P-201ENST00000618246 284 ntBASIC5.48□□□□□ -1.53
LONRF3Q496Y0 OR51H2P-202ENST00000641424 3046 ntBASIC5.48□□□□□ -1.53
LONRF3Q496Y0 AC107081.3-201ENST00000612715 2034 ntBASIC5.48□□□□□ -1.53
LONRF3Q496Y0 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.48□□□□□ -1.53
LONRF3Q496Y0 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.48□□□□□ -1.53
LONRF3Q496Y0 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.48□□□□□ -1.53
LONRF3Q496Y0 PNPT1P2-201ENST00000456768 2050 ntBASIC5.47□□□□□ -1.53
LONRF3Q496Y0 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
LONRF3Q496Y0 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LONRF3Q496Y0 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
LONRF3Q496Y0 AP001642.1-201ENST00000624727 2117 ntBASIC5.47□□□□□ -1.53
LONRF3Q496Y0 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LONRF3Q496Y0 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
LONRF3Q496Y0 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LONRF3Q496Y0 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
LONRF3Q496Y0 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LONRF3Q496Y0 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.47□□□□□ -1.53
LONRF3Q496Y0 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
LONRF3Q496Y0 MIR708-201ENST00000390708 88 ntBASIC5.47□□□□□ -1.53
LONRF3Q496Y0 AL359643.1-201ENST00000404109 423 ntBASIC5.47□□□□□ -1.53
LONRF3Q496Y0 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LONRF3Q496Y0 U3.35-201ENST00000408405 208 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 165.4 ms